Cluster: SPMP12_bin.36_CGC4
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP12_bin.36
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_190201 | opera_contig_190201_421 | 427609 | 428700 | - | CBM50 |
| pfam | opera_contig_190201 | opera_contig_190201_422 | 428856 | 429428 | + | DUF1256 |
| TC | opera_contig_190201 | opera_contig_190201_423 | 429397 | 430452 | - | 9.A.23.1.1 |
| NULL(UNKNOWN) | opera_contig_190201 | opera_contig_190201_424 | 430584 | 430850 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | opera_contig_190201 | opera_contig_190201_425 | 430917 | 431429 | - | dUTPase |
| CAZyme | opera_contig_190201 | opera_contig_190201_426 | 431518 | 432309 | - | CE4 |
| NULL(UNKNOWN) | opera_contig_190201 | opera_contig_190201_427 | 432355 | 433044 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | opera_contig_190201 | opera_contig_190201_428 | 433130 | 433822 | - | PNP_UDP_1 |
| TC | opera_contig_190201 | opera_contig_190201_429 | 433962 | 434393 | - | 4.A.2.1.12 |
| pfam | opera_contig_190201 | opera_contig_190201_430 | 434636 | 434881 | + | TSCPD |
| CAZyme | opera_contig_190201 | opera_contig_190201_431 | 434897 | 435976 | + | GT28 |
Gene ID: opera_contig_190201_421
Type: CAZyme
Location: 427609 - 428700 (-)
Type: CAZyme
Location: 427609 - 428700 (-)
Gene ID: opera_contig_190201_422
Type: pfam
Location: 428856 - 429428 (+)
Type: pfam
Location: 428856 - 429428 (+)
Gene ID: opera_contig_190201_423
Type: TC
Location: 429397 - 430452 (-)
Type: TC
Location: 429397 - 430452 (-)
Gene ID: opera_contig_190201_424
Type:
Location: 430584 - 430850 (+)
Type:
Location: 430584 - 430850 (+)
Gene ID: opera_contig_190201_425
Type: pfam
Location: 430917 - 431429 (-)
Type: pfam
Location: 430917 - 431429 (-)
Gene ID: opera_contig_190201_426
Type: CAZyme
Location: 431518 - 432309 (-)
Type: CAZyme
Location: 431518 - 432309 (-)
Gene ID: opera_contig_190201_427
Type:
Location: 432355 - 433044 (-)
Type:
Location: 432355 - 433044 (-)
Gene ID: opera_contig_190201_428
Type: pfam
Location: 433130 - 433822 (-)
Type: pfam
Location: 433130 - 433822 (-)
Gene ID: opera_contig_190201_429
Type: TC
Location: 433962 - 434393 (-)
Type: TC
Location: 433962 - 434393 (-)
Gene ID: opera_contig_190201_430
Type: pfam
Location: 434636 - 434881 (+)
Type: pfam
Location: 434636 - 434881 (+)
Gene ID: opera_contig_190201_431
Type: CAZyme
Location: 434897 - 435976 (+)
Type: CAZyme
Location: 434897 - 435976 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190201_421 | vegan > omnivore | 1.41590 | 0.01416 |
| opera_contig_190201_421 | vegetarian > omnivore | 1.24540 | 0.01287 |
| opera_contig_190201_424 | vegan > omnivore | 1.50525 | 0.01416 |
| opera_contig_190201_428 | vegan > omnivore | 1.83560 | 0.01416 |