Cluster: SPMP12_bin.36_CGC3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP12_bin.36
- CGC Family ID: CGCFAM_01431
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_190201 | opera_contig_190201_370 | 380166 | 380852 | - | 9.B.144.1.5 |
| CAZyme | opera_contig_190201 | opera_contig_190201_371 | 380815 | 381561 | - | GT2 |
| pfam | opera_contig_190201 | opera_contig_190201_372 | 381765 | 383099 | + | ELFV_dehydrog | ELFV_dehydrog_N |
| TC | opera_contig_190201 | opera_contig_190201_373 | 383216 | 384547 | - | 2.A.66.1.33 |
| NULL(UNKNOWN) | opera_contig_190201 | opera_contig_190201_374 | 384547 | 384774 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_190201 | opera_contig_190201_375 | 384901 | 385980 | - | 4.A.2.1.22 |
| TC | opera_contig_190201 | opera_contig_190201_376 | 386003 | 386203 | - | 4.A.2.1.22 |
| pfam | opera_contig_190201 | opera_contig_190201_377 | 386164 | 386307 | - | PTS_IIB |
| TC | opera_contig_190201 | opera_contig_190201_378 | 386323 | 386772 | - | 4.A.2.1.22 |
Gene ID: opera_contig_190201_370
Type: TC
Location: 380166 - 380852 (-)
Type: TC
Location: 380166 - 380852 (-)
Gene ID: opera_contig_190201_371
Type: CAZyme
Location: 380815 - 381561 (-)
Type: CAZyme
Location: 380815 - 381561 (-)
Gene ID: opera_contig_190201_372
Type: pfam
Location: 381765 - 383099 (+)
Type: pfam
Location: 381765 - 383099 (+)
Gene ID: opera_contig_190201_373
Type: TC
Location: 383216 - 384547 (-)
Type: TC
Location: 383216 - 384547 (-)
Gene ID: opera_contig_190201_374
Type:
Location: 384547 - 384774 (-)
Type:
Location: 384547 - 384774 (-)
Gene ID: opera_contig_190201_375
Type: TC
Location: 384901 - 385980 (-)
Type: TC
Location: 384901 - 385980 (-)
Gene ID: opera_contig_190201_376
Type: TC
Location: 386003 - 386203 (-)
Type: TC
Location: 386003 - 386203 (-)
Gene ID: opera_contig_190201_377
Type: pfam
Location: 386164 - 386307 (-)
Type: pfam
Location: 386164 - 386307 (-)
Gene ID: opera_contig_190201_378
Type: TC
Location: 386323 - 386772 (-)
Type: TC
Location: 386323 - 386772 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190201_370 | vegan > omnivore | 1.22653 | 0.01416 |
| opera_contig_190201_371 | vegan > omnivore | 1.41693 | 0.01416 |