Cluster: SPMP12_bin.36_CGC24
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP12_bin.36
- CGC Family ID: CGCFAM_08668
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_190205 | opera_contig_190205_24 | 22016 | 22783 | + | CE4 |
| pfam | opera_contig_190205 | opera_contig_190205_25 | 22841 | 23443 | + | MMR_HSR1 | FeoB_N | PduV-EutP |
| TF | opera_contig_190205 | opera_contig_190205_26 | 23444 | 23977 | - | 0041905 |
| TC | opera_contig_190205 | opera_contig_190205_27 | 24101 | 24724 | + | 9.A.11.1.1 |
| TC | opera_contig_190205 | opera_contig_190205_28 | 24711 | 25127 | + | 9.A.11.1.1 |
| TC | opera_contig_190205 | opera_contig_190205_29 | 25165 | 25527 | + | 9.A.11.1.1 |
| TC | opera_contig_190205 | opera_contig_190205_30 | 25698 | 26642 | + | 9.A.11.1.1 |
| pfam | opera_contig_190205 | opera_contig_190205_31 | 26645 | 27001 | + | SpoVAC_SpoVAEB |
| CAZyme | opera_contig_190205 | opera_contig_190205_32 | 27036 | 29573 | - | GT51 |
Gene ID: opera_contig_190205_24
Type: CAZyme
Location: 22016 - 22783 (+)
Type: CAZyme
Location: 22016 - 22783 (+)
Gene ID: opera_contig_190205_25
Type: pfam
Location: 22841 - 23443 (+)
Type: pfam
Location: 22841 - 23443 (+)
Gene ID: opera_contig_190205_26
Type: TF
Location: 23444 - 23977 (-)
Type: TF
Location: 23444 - 23977 (-)
Gene ID: opera_contig_190205_27
Type: TC
Location: 24101 - 24724 (+)
Type: TC
Location: 24101 - 24724 (+)
Gene ID: opera_contig_190205_28
Type: TC
Location: 24711 - 25127 (+)
Type: TC
Location: 24711 - 25127 (+)
Gene ID: opera_contig_190205_29
Type: TC
Location: 25165 - 25527 (+)
Type: TC
Location: 25165 - 25527 (+)
Gene ID: opera_contig_190205_30
Type: TC
Location: 25698 - 26642 (+)
Type: TC
Location: 25698 - 26642 (+)
Gene ID: opera_contig_190205_31
Type: pfam
Location: 26645 - 27001 (+)
Type: pfam
Location: 26645 - 27001 (+)
Gene ID: opera_contig_190205_32
Type: CAZyme
Location: 27036 - 29573 (-)
Type: CAZyme
Location: 27036 - 29573 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190205_28 | vegan > omnivore | 1.51391 | 0.01416 |
| opera_contig_190205_29 | vegan > omnivore | 2.29638 | 0.01416 |
| opera_contig_190205_31 | vegan > omnivore | 3.11249 | 0.01416 |
| opera_contig_190205_32 | vegan > omnivore | 1.82207 | 0.01416 |