Cluster: SPMP12_bin.36_CGC23
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate: host glycan/beta-glucan
- Genome ID: SPMP12_bin.36
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_190205 | opera_contig_190205_10 | 6998 | 8110 | + | CE9 |
| CAZyme | opera_contig_190205 | opera_contig_190205_11 | 8194 | 8967 | + | CE4 |
| pfam | opera_contig_190205 | opera_contig_190205_12 | 9153 | 9998 | + | PRD | PRD | CAT_RBD |
| TC | opera_contig_190205 | opera_contig_190205_13 | 10163 | 10861 | + | 4.A.1.2.11 |
| TC | opera_contig_190205 | opera_contig_190205_14 | 10831 | 12039 | + | 4.A.1.2.11 |
| CAZyme | opera_contig_190205 | opera_contig_190205_15 | 12044 | 13483 | + | GH1 |
| pfam | opera_contig_190205 | opera_contig_190205_16 | 13881 | 14630 | + | DUF4430 |
| NULL(UNKNOWN) | opera_contig_190205 | opera_contig_190205_17 | 14631 | 15461 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_190205 | opera_contig_190205_18 | 15454 | 17007 | + | 3.A.1.32.2 |
| TC | opera_contig_190205 | opera_contig_190205_19 | 17001 | 17657 | + | 3.A.1.32.2 |
Gene ID: opera_contig_190205_10
Type: CAZyme
Location: 6998 - 8110 (+)
Type: CAZyme
Location: 6998 - 8110 (+)
Gene ID: opera_contig_190205_11
Type: CAZyme
Location: 8194 - 8967 (+)
Type: CAZyme
Location: 8194 - 8967 (+)
Gene ID: opera_contig_190205_12
Type: pfam
Location: 9153 - 9998 (+)
Type: pfam
Location: 9153 - 9998 (+)
Gene ID: opera_contig_190205_13
Type: TC
Location: 10163 - 10861 (+)
Type: TC
Location: 10163 - 10861 (+)
Gene ID: opera_contig_190205_14
Type: TC
Location: 10831 - 12039 (+)
Type: TC
Location: 10831 - 12039 (+)
Gene ID: opera_contig_190205_15
Type: CAZyme
Location: 12044 - 13483 (+)
Type: CAZyme
Location: 12044 - 13483 (+)
Gene ID: opera_contig_190205_16
Type: pfam
Location: 13881 - 14630 (+)
Type: pfam
Location: 13881 - 14630 (+)
Gene ID: opera_contig_190205_17
Type:
Location: 14631 - 15461 (+)
Type:
Location: 14631 - 15461 (+)
Gene ID: opera_contig_190205_18
Type: TC
Location: 15454 - 17007 (+)
Type: TC
Location: 15454 - 17007 (+)
Gene ID: opera_contig_190205_19
Type: TC
Location: 17001 - 17657 (+)
Type: TC
Location: 17001 - 17657 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190205_10 | vegan > omnivore | 1.82955 | 0.01416 |
| opera_contig_190205_18 | vegan > omnivore | 2.74111 | 0.01416 |
| opera_contig_190205_19 | vegan > omnivore | 2.58306 | 0.01416 |