Cluster: SPMP12_bin.36_CGC22
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate:
- Genome ID: SPMP12_bin.36
- CGC Family ID: CGCFAM_00953
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_190204 | opera_contig_190204_220 | 207510 | 208514 | - | GT2 |
| NULL(UNKNOWN) | opera_contig_190204 | opera_contig_190204_221 | 208768 | 209352 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_190204 | opera_contig_190204_222 | 209397 | 210086 | - | 2.A.66.1.40 |
| CAZyme | opera_contig_190204 | opera_contig_190204_223 | 210106 | 211248 | - | GT4 |
| CAZyme | opera_contig_190204 | opera_contig_190204_224 | 211241 | 212380 | - | GT4 |
| pfam | opera_contig_190204 | opera_contig_190204_225 | 212377 | 212982 | - | Gly_transf_sug |
| CAZyme | opera_contig_190204 | opera_contig_190204_226 | 213108 | 214307 | - | GT4 |
| TC | opera_contig_190204 | opera_contig_190204_227 | 214252 | 215424 | - | 9.B.183.1.9 |
| CAZyme | opera_contig_190204 | opera_contig_190204_228 | 215438 | 216340 | - | GT2 |
| CAZyme | opera_contig_190204 | opera_contig_190204_229 | 216330 | 217427 | - | GT4 |
| CAZyme | opera_contig_190204 | opera_contig_190204_230 | 217429 | 218523 | - | GT4 |
| pfam | opera_contig_190204 | opera_contig_190204_231 | 218513 | 219181 | - | PglD_N |
| TC | opera_contig_190204 | opera_contig_190204_232 | 219174 | 221309 | - | 9.B.18.1.1 |
| pfam | opera_contig_190204 | opera_contig_190204_233 | 221263 | 221418 | - | Bac_transf |
| STP | opera_contig_190204 | opera_contig_190204_234 | 221444 | 222577 | - | Aminotran_1_2 |
| TC | opera_contig_190204 | opera_contig_190204_235 | 222594 | 223751 | - | 9.B.18.2.1 |
Gene ID: opera_contig_190204_220
Type: CAZyme
Location: 207510 - 208514 (-)
Type: CAZyme
Location: 207510 - 208514 (-)
Gene ID: opera_contig_190204_221
Type:
Location: 208768 - 209352 (-)
Type:
Location: 208768 - 209352 (-)
Gene ID: opera_contig_190204_222
Type: TC
Location: 209397 - 210086 (-)
Type: TC
Location: 209397 - 210086 (-)
Gene ID: opera_contig_190204_223
Type: CAZyme
Location: 210106 - 211248 (-)
Type: CAZyme
Location: 210106 - 211248 (-)
Gene ID: opera_contig_190204_224
Type: CAZyme
Location: 211241 - 212380 (-)
Type: CAZyme
Location: 211241 - 212380 (-)
Gene ID: opera_contig_190204_225
Type: pfam
Location: 212377 - 212982 (-)
Type: pfam
Location: 212377 - 212982 (-)
Gene ID: opera_contig_190204_226
Type: CAZyme
Location: 213108 - 214307 (-)
Type: CAZyme
Location: 213108 - 214307 (-)
Gene ID: opera_contig_190204_227
Type: TC
Location: 214252 - 215424 (-)
Type: TC
Location: 214252 - 215424 (-)
Gene ID: opera_contig_190204_228
Type: CAZyme
Location: 215438 - 216340 (-)
Type: CAZyme
Location: 215438 - 216340 (-)
Gene ID: opera_contig_190204_229
Type: CAZyme
Location: 216330 - 217427 (-)
Type: CAZyme
Location: 216330 - 217427 (-)
Gene ID: opera_contig_190204_230
Type: CAZyme
Location: 217429 - 218523 (-)
Type: CAZyme
Location: 217429 - 218523 (-)
Gene ID: opera_contig_190204_231
Type: pfam
Location: 218513 - 219181 (-)
Type: pfam
Location: 218513 - 219181 (-)
Gene ID: opera_contig_190204_232
Type: TC
Location: 219174 - 221309 (-)
Type: TC
Location: 219174 - 221309 (-)
Gene ID: opera_contig_190204_233
Type: pfam
Location: 221263 - 221418 (-)
Type: pfam
Location: 221263 - 221418 (-)
Gene ID: opera_contig_190204_234
Type: STP
Location: 221444 - 222577 (-)
Type: STP
Location: 221444 - 222577 (-)
Gene ID: opera_contig_190204_235
Type: TC
Location: 222594 - 223751 (-)
Type: TC
Location: 222594 - 223751 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190204_220 | vegan > omnivore | 2.47764 | 0.01416 |
| opera_contig_190204_221 | vegan > omnivore | 2.69049 | 0.01416 |
| opera_contig_190204_222 | vegan > omnivore | 2.25290 | 0.01416 |
| opera_contig_190204_235 | vegan > omnivore | 1.28371 | 0.01416 |
| opera_contig_190204_235 | vegetarian > omnivore | 2.19909 | 0.01287 |