Cluster: SPMP12_bin.36_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP12_bin.36
- CGC Family ID: CGCFAM_02798
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_190204 | opera_contig_190204_128 | 122508 | 123269 | - | 3.A.1.3.10 |
| TC | opera_contig_190204 | opera_contig_190204_129 | 123282 | 123938 | - | 3.A.1.3.10 |
| TC | opera_contig_190204 | opera_contig_190204_130 | 124043 | 124846 | - | 3.A.1.3.27 |
| pfam | opera_contig_190204 | opera_contig_190204_131 | 125084 | 125644 | + | Cu_amine_oxidN1 |
| CAZyme | opera_contig_190204 | opera_contig_190204_132 | 125665 | 126390 | + | GH73 |
Gene ID: opera_contig_190204_128
Type: TC
Location: 122508 - 123269 (-)
Type: TC
Location: 122508 - 123269 (-)
Gene ID: opera_contig_190204_129
Type: TC
Location: 123282 - 123938 (-)
Type: TC
Location: 123282 - 123938 (-)
Gene ID: opera_contig_190204_130
Type: TC
Location: 124043 - 124846 (-)
Type: TC
Location: 124043 - 124846 (-)
Gene ID: opera_contig_190204_131
Type: pfam
Location: 125084 - 125644 (+)
Type: pfam
Location: 125084 - 125644 (+)
Gene ID: opera_contig_190204_132
Type: CAZyme
Location: 125665 - 126390 (+)
Type: CAZyme
Location: 125665 - 126390 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190204_128 | vegan > omnivore | 1.07637 | 0.01416 |
| opera_contig_190204_129 | vegan > omnivore | 1.34236 | 0.01416 |
| opera_contig_190204_132 | vegan > omnivore | 2.64650 | 0.01416 |