Cluster: SPMP12_bin.36_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: SPMP12_bin.36
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_190203 | opera_contig_190203_280 | 282523 | 284808 | - | CBM48 | GH13_9 |
| STP | opera_contig_190203 | opera_contig_190203_281 | 285241 | 286458 | - | ACT | PALP |
| TC | opera_contig_190203 | opera_contig_190203_282 | 286460 | 287395 | - | 3.A.5.1.1 |
Gene ID: opera_contig_190203_280
Type: CAZyme
Location: 282523 - 284808 (-)
Type: CAZyme
Location: 282523 - 284808 (-)
Gene ID: opera_contig_190203_281
Type: STP
Location: 285241 - 286458 (-)
Type: STP
Location: 285241 - 286458 (-)
Gene ID: opera_contig_190203_282
Type: TC
Location: 286460 - 287395 (-)
Type: TC
Location: 286460 - 287395 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190203_282 | vegan > omnivore | 1.48293 | 0.01416 |