Cluster: SPMP12_bin.36_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP12_bin.36
- CGC Family ID: CGCFAM_00778
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_190203 | opera_contig_190203_272 | 272532 | 274199 | + | 2.A.58.2.2 |
| CAZyme | opera_contig_190203 | opera_contig_190203_273 | 274261 | 276183 | - | GH13_39 |
| CAZyme | opera_contig_190203 | opera_contig_190203_274 | 276211 | 278652 | - | GT35 |
| CAZyme | opera_contig_190203 | opera_contig_190203_275 | 278739 | 280184 | - | GT5 |
Gene ID: opera_contig_190203_272
Type: TC
Location: 272532 - 274199 (+)
Type: TC
Location: 272532 - 274199 (+)
Gene ID: opera_contig_190203_273
Type: CAZyme
Location: 274261 - 276183 (-)
Type: CAZyme
Location: 274261 - 276183 (-)
Gene ID: opera_contig_190203_274
Type: CAZyme
Location: 276211 - 278652 (-)
Type: CAZyme
Location: 276211 - 278652 (-)
Gene ID: opera_contig_190203_275
Type: CAZyme
Location: 278739 - 280184 (-)
Type: CAZyme
Location: 278739 - 280184 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190203_274 | vegan > omnivore | 1.41419 | 0.01416 |
| opera_contig_190203_275 | vegan > omnivore | 1.06192 | 0.01416 |