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Cluster: SPMP11_bin.113_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_4 opera_contig_4_40 47594 48901 + GH27
pfam opera_contig_4 opera_contig_4_41 48977 50008 - Aminotran_4
pfam opera_contig_4 opera_contig_4_42 50148 51305 + Lactamase_B | Flavodoxin_5 | ODP
TC opera_contig_4 opera_contig_4_43 51328 52839 + 2.A.2.1.1
TC opera_contig_4 opera_contig_4_44 52907 54475 - 2.A.49.5.1
pfam opera_contig_4 opera_contig_4_45 54789 55214 + NfeD
TC opera_contig_4 opera_contig_4_46 55244 56167 + 8.A.21.2.2
Gene ID: opera_contig_4_40
Type: CAZyme
Location: 47594 - 48901 (+)
Gene ID: opera_contig_4_41
Type: pfam
Location: 48977 - 50008 (-)
Gene ID: opera_contig_4_42
Type: pfam
Location: 50148 - 51305 (+)
Gene ID: opera_contig_4_43
Type: TC
Location: 51328 - 52839 (+)
Gene ID: opera_contig_4_44
Type: TC
Location: 52907 - 54475 (-)
Gene ID: opera_contig_4_45
Type: pfam
Location: 54789 - 55214 (+)
Gene ID: opera_contig_4_46
Type: TC
Location: 55244 - 56167 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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