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Cluster: SPMP11_bin.113_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_3 opera_contig_3_217 237869 240391 + 9.A.8.1.6
pfam opera_contig_3 opera_contig_3_218 240427 240615 + FeoB_associated
TF opera_contig_3 opera_contig_3_219 240619 240978 + Fe_dep_repress
CAZyme opera_contig_3 opera_contig_3_220 241278 242240 - GT2
CAZyme opera_contig_3 opera_contig_3_221 242233 243402 - GT2
pfam opera_contig_3 opera_contig_3_222 243406 244521 - FAD_binding_2 | Amino_oxidase | GLF | NAD_binding_8
CAZyme opera_contig_3 opera_contig_3_223 244535 245665 - GT2
Gene ID: opera_contig_3_217
Type: TC
Location: 237869 - 240391 (+)
Gene ID: opera_contig_3_218
Type: pfam
Location: 240427 - 240615 (+)
Gene ID: opera_contig_3_219
Type: TF
Location: 240619 - 240978 (+)
Gene ID: opera_contig_3_220
Type: CAZyme
Location: 241278 - 242240 (-)
Gene ID: opera_contig_3_221
Type: CAZyme
Location: 242233 - 243402 (-)
Gene ID: opera_contig_3_222
Type: pfam
Location: 243406 - 244521 (-)
Gene ID: opera_contig_3_223
Type: CAZyme
Location: 244535 - 245665 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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