Cluster: SPMP11_bin.113_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP11_bin.113
- CGC Family ID: CGCFAM_00050
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_30 | opera_contig_30_91 | 105857 | 106627 | + | 8.A.3.2.3 |
| TC | opera_contig_30 | opera_contig_30_92 | 106630 | 107400 | + | 8.A.3.2.1 |
| TC | opera_contig_30 | opera_contig_30_93 | 107419 | 108927 | + | 9.B.18.1.2 |
| CAZyme | opera_contig_30 | opera_contig_30_94 | 108933 | 110054 | + | GT4 |
| pfam | opera_contig_30 | opera_contig_30_95 | 110059 | 111057 | + | Acyl_transf_3 |
| CAZyme | opera_contig_30 | opera_contig_30_96 | 111038 | 112237 | + | GT4 |
Gene ID: opera_contig_30_91
Type: TC
Location: 105857 - 106627 (+)
Type: TC
Location: 105857 - 106627 (+)
Gene ID: opera_contig_30_92
Type: TC
Location: 106630 - 107400 (+)
Type: TC
Location: 106630 - 107400 (+)
Gene ID: opera_contig_30_93
Type: TC
Location: 107419 - 108927 (+)
Type: TC
Location: 107419 - 108927 (+)
Gene ID: opera_contig_30_94
Type: CAZyme
Location: 108933 - 110054 (+)
Type: CAZyme
Location: 108933 - 110054 (+)
Gene ID: opera_contig_30_95
Type: pfam
Location: 110059 - 111057 (+)
Type: pfam
Location: 110059 - 111057 (+)
Gene ID: opera_contig_30_96
Type: CAZyme
Location: 111038 - 112237 (+)
Type: CAZyme
Location: 111038 - 112237 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900555015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.