Cluster: SPMP11_bin.113_CGC23
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: SPMP11_bin.113
- CGC Family ID: CGCFAM_09393
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_30 | opera_contig_30_76 | 83658 | 86327 | + | GH95 |
| CAZyme | opera_contig_30 | opera_contig_30_77 | 86378 | 88027 | - | GH36 |
| CAZyme | opera_contig_30 | opera_contig_30_78 | 88058 | 89104 | - | GH16 |
| TC | opera_contig_30 | opera_contig_30_79 | 89327 | 90130 | + | 9.B.115.1.1 |
| NULL(UNKNOWN) | opera_contig_30 | opera_contig_30_80 | 90134 | 90616 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_30 | opera_contig_30_81 | 90650 | 92953 | - | GH31_2 |
| peptidase | opera_contig_30 | opera_contig_30_82 | 92953 | 94281 | - | S09.UPW |
| TC | opera_contig_30 | opera_contig_30_83 | 94303 | 95703 | - | 2.A.2.3.2 |
| TC | opera_contig_30 | opera_contig_30_84 | 95966 | 97333 | + | 2.A.25.1.5 |
Gene ID: opera_contig_30_76
Type: CAZyme
Location: 83658 - 86327 (+)
Type: CAZyme
Location: 83658 - 86327 (+)
Gene ID: opera_contig_30_77
Type: CAZyme
Location: 86378 - 88027 (-)
Type: CAZyme
Location: 86378 - 88027 (-)
Gene ID: opera_contig_30_78
Type: CAZyme
Location: 88058 - 89104 (-)
Type: CAZyme
Location: 88058 - 89104 (-)
Gene ID: opera_contig_30_79
Type: TC
Location: 89327 - 90130 (+)
Type: TC
Location: 89327 - 90130 (+)
Gene ID: opera_contig_30_80
Type:
Location: 90134 - 90616 (+)
Type:
Location: 90134 - 90616 (+)
Gene ID: opera_contig_30_81
Type: CAZyme
Location: 90650 - 92953 (-)
Type: CAZyme
Location: 90650 - 92953 (-)
Gene ID: opera_contig_30_82
Type: peptidase
Location: 92953 - 94281 (-)
Type: peptidase
Location: 92953 - 94281 (-)
Gene ID: opera_contig_30_83
Type: TC
Location: 94303 - 95703 (-)
Type: TC
Location: 94303 - 95703 (-)
Gene ID: opera_contig_30_84
Type: TC
Location: 95966 - 97333 (+)
Type: TC
Location: 95966 - 97333 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900555015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_30_81 | vegetarian > omnivore | 6.83937 | 0.00096 |
| opera_contig_30_82 | vegetarian > omnivore | 7.07127 | 0.00096 |
| opera_contig_30_83 | vegetarian > omnivore | 4.58889 | 0.00096 |