Cluster: SPMP11_bin.113_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP11_bin.113
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_3 | opera_contig_3_12 | 16337 | 17602 | - | 9.A.40.2.2 |
| pfam | opera_contig_3 | opera_contig_3_13 | 17680 | 19110 | - | Radical_SAM |
| CAZyme | opera_contig_3 | opera_contig_3_14 | 19227 | 22286 | - | GH2 |
| TC | opera_contig_3 | opera_contig_3_15 | 22323 | 22940 | - | 9.B.18.1.2 |
| pfam | opera_contig_3 | opera_contig_3_16 | 22943 | 23539 | - | Cyclase |
| NULL(UNKNOWN) | opera_contig_3 | opera_contig_3_17 | 23767 | 24363 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_3 | opera_contig_3_18 | 24467 | 27223 | + | 3.A.5.1.3 |
Gene ID: opera_contig_3_12
Type: TC
Location: 16337 - 17602 (-)
Type: TC
Location: 16337 - 17602 (-)
Gene ID: opera_contig_3_13
Type: pfam
Location: 17680 - 19110 (-)
Type: pfam
Location: 17680 - 19110 (-)
Gene ID: opera_contig_3_14
Type: CAZyme
Location: 19227 - 22286 (-)
Type: CAZyme
Location: 19227 - 22286 (-)
Gene ID: opera_contig_3_15
Type: TC
Location: 22323 - 22940 (-)
Type: TC
Location: 22323 - 22940 (-)
Gene ID: opera_contig_3_16
Type: pfam
Location: 22943 - 23539 (-)
Type: pfam
Location: 22943 - 23539 (-)
Gene ID: opera_contig_3_17
Type:
Location: 23767 - 24363 (+)
Type:
Location: 23767 - 24363 (+)
Gene ID: opera_contig_3_18
Type: TC
Location: 24467 - 27223 (+)
Type: TC
Location: 24467 - 27223 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900555015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_3_13 | vegetarian > omnivore | 1.43365 | 0.00096 |