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Cluster: SPMP11_bin.113_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_8 opera_contig_8_56 45039 46403 - GH33
pfam opera_contig_8 opera_contig_8_57 46522 47727 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC opera_contig_8 opera_contig_8_58 47861 49399 + 2.A.2.3.3
pfam opera_contig_8 opera_contig_8_59 49521 50096 + Hexapep | Mac | Hexapep_2 | Hexapep_2
sulfatase opera_contig_8 opera_contig_8_60 50174 51499 - S1_65
TC opera_contig_8 opera_contig_8_61 51524 52312 - 2.A.102.4.4
TC opera_contig_8 opera_contig_8_62 52312 53367 - 1.A.23.4.1
pfam opera_contig_8 opera_contig_8_63 53414 53914 - Methyltransf_21
NULL(UNKNOWN) opera_contig_8 opera_contig_8_64 54025 54468 - NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_8 opera_contig_8_65 54639 55391 + 9.A.40.1.1
Gene ID: opera_contig_8_56
Type: CAZyme
Location: 45039 - 46403 (-)
Gene ID: opera_contig_8_57
Type: pfam
Location: 46522 - 47727 (+)
Gene ID: opera_contig_8_58
Type: TC
Location: 47861 - 49399 (+)
Gene ID: opera_contig_8_59
Type: pfam
Location: 49521 - 50096 (+)
Gene ID: opera_contig_8_60
Type: sulfatase
Location: 50174 - 51499 (-)
Gene ID: opera_contig_8_61
Type: TC
Location: 51524 - 52312 (-)
Gene ID: opera_contig_8_62
Type: TC
Location: 52312 - 53367 (-)
Gene ID: opera_contig_8_63
Type: pfam
Location: 53414 - 53914 (-)
Gene ID: opera_contig_8_64
Type:
Location: 54025 - 54468 (-)
Gene ID: opera_contig_8_65
Type: TC
Location: 54639 - 55391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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