Cluster: SPMP11_bin.113_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP11_bin.113
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_4 | opera_contig_4_227 | 254700 | 255635 | + | 1.A.35.1.2 |
| pfam | opera_contig_4 | opera_contig_4_228 | 255657 | 257801 | + | S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5 |
| CAZyme | opera_contig_4 | opera_contig_4_229 | 257851 | 259272 | - | GT5 |
| pfam | opera_contig_4 | opera_contig_4_230 | 259286 | 260407 | - | NTP_transferase | Hexapep_GlmU |
| pfam | opera_contig_4 | opera_contig_4_231 | 260412 | 261620 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | opera_contig_4 | opera_contig_4_232 | 261636 | 263516 | - | CBM48 | GH13_9 |
Gene ID: opera_contig_4_227
Type: TC
Location: 254700 - 255635 (+)
Type: TC
Location: 254700 - 255635 (+)
Gene ID: opera_contig_4_228
Type: pfam
Location: 255657 - 257801 (+)
Type: pfam
Location: 255657 - 257801 (+)
Gene ID: opera_contig_4_229
Type: CAZyme
Location: 257851 - 259272 (-)
Type: CAZyme
Location: 257851 - 259272 (-)
Gene ID: opera_contig_4_230
Type: pfam
Location: 259286 - 260407 (-)
Type: pfam
Location: 259286 - 260407 (-)
Gene ID: opera_contig_4_231
Type: pfam
Location: 260412 - 261620 (-)
Type: pfam
Location: 260412 - 261620 (-)
Gene ID: opera_contig_4_232
Type: CAZyme
Location: 261636 - 263516 (-)
Type: CAZyme
Location: 261636 - 263516 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900555015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_4_231 | vegetarian > omnivore | 2.05339 | 0.00096 |