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Cluster: SPMP11_bin.113_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_4 opera_contig_4_144 165693 166370 + 3.A.1.122.14
NULL(UNKNOWN) opera_contig_4 opera_contig_4_145 166391 167773 + NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_4 opera_contig_4_146 167760 169091 + 3.A.1.122.2
TF opera_contig_4 opera_contig_4_147 169108 169473 + GntR
TC opera_contig_4 opera_contig_4_148 169470 170372 + 3.A.1.128.6
NULL(UNKNOWN) opera_contig_4 opera_contig_4_149 170347 172323 + NULL(UNKNOWN)
[View Structural Homologs]
pfam opera_contig_4 opera_contig_4_150 172757 173218 + OAD_gamma
TC opera_contig_4 opera_contig_4_151 173233 174465 + 3.B.1.1.2
pfam opera_contig_4 opera_contig_4_152 174557 176758 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
NULL(UNKNOWN) opera_contig_4 opera_contig_4_153 176822 177646 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_4 opera_contig_4_154 177714 179231 - GH77
Gene ID: opera_contig_4_144
Type: TC
Location: 165693 - 166370 (+)
Gene ID: opera_contig_4_145
Type:
Location: 166391 - 167773 (+)
Gene ID: opera_contig_4_146
Type: TC
Location: 167760 - 169091 (+)
Gene ID: opera_contig_4_147
Type: TF
Location: 169108 - 169473 (+)
Gene ID: opera_contig_4_148
Type: TC
Location: 169470 - 170372 (+)
Gene ID: opera_contig_4_149
Type:
Location: 170347 - 172323 (+)
Gene ID: opera_contig_4_150
Type: pfam
Location: 172757 - 173218 (+)
Gene ID: opera_contig_4_151
Type: TC
Location: 173233 - 174465 (+)
Gene ID: opera_contig_4_152
Type: pfam
Location: 174557 - 176758 (+)
Gene ID: opera_contig_4_153
Type:
Location: 176822 - 177646 (-)
Gene ID: opera_contig_4_154
Type: CAZyme
Location: 177714 - 179231 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_4_151 vegetarian > vegan 1.48507 0.00450

🧭 Explore Read Mapping of CGC

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