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Cluster: SPMP103_bin.30_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_33 opera_contig_33_56 56165 56587 + 3.A.1.3.15
pfam opera_contig_33 opera_contig_33_57 56532 56837 + BPD_transp_1
TC opera_contig_33 opera_contig_33_58 56854 57600 + 3.A.1.3.23
TC opera_contig_33 opera_contig_33_59 57930 59402 - 2.A.66.1.33
NULL(UNKNOWN) opera_contig_33 opera_contig_33_60 59518 59769 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_33 opera_contig_33_61 59797 60762 + GT2
pfam opera_contig_33 opera_contig_33_62 61009 62835 + GtrA_DPMS_TM | PMT_2
pfam opera_contig_33 opera_contig_33_63 63120 63920 - S6PP | Hydrolase_3
TC opera_contig_33 opera_contig_33_64 63948 64748 - 3.A.1.25.6
TC opera_contig_33 opera_contig_33_65 64742 65614 - 3.A.1.26.9
TC opera_contig_33 opera_contig_33_66 65607 66470 - 3.A.1.26.7
Gene ID: opera_contig_33_56
Type: TC
Location: 56165 - 56587 (+)
Gene ID: opera_contig_33_57
Type: pfam
Location: 56532 - 56837 (+)
Gene ID: opera_contig_33_58
Type: TC
Location: 56854 - 57600 (+)
Gene ID: opera_contig_33_59
Type: TC
Location: 57930 - 59402 (-)
Gene ID: opera_contig_33_60
Type:
Location: 59518 - 59769 (+)
Gene ID: opera_contig_33_61
Type: CAZyme
Location: 59797 - 60762 (+)
Gene ID: opera_contig_33_62
Type: pfam
Location: 61009 - 62835 (+)
Gene ID: opera_contig_33_63
Type: pfam
Location: 63120 - 63920 (-)
Gene ID: opera_contig_33_64
Type: TC
Location: 63948 - 64748 (-)
Gene ID: opera_contig_33_65
Type: TC
Location: 64742 - 65614 (-)
Gene ID: opera_contig_33_66
Type: TC
Location: 65607 - 66470 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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