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Cluster: SPMP103_bin.30_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_30 opera_contig_30_42 39136 39825 + 3.A.1.122.14
pfam opera_contig_30 opera_contig_30_43 39812 42298 + FtsX | FtsX
TF opera_contig_30 opera_contig_30_44 42808 43548 + HTH_6
TC opera_contig_30 opera_contig_30_45 43742 45682 + 4.A.1.2.2
CAZyme opera_contig_30 opera_contig_30_46 45775 47022 + GH1
Gene ID: opera_contig_30_42
Type: TC
Location: 39136 - 39825 (+)
Gene ID: opera_contig_30_43
Type: pfam
Location: 39812 - 42298 (+)
Gene ID: opera_contig_30_44
Type: TF
Location: 42808 - 43548 (+)
Gene ID: opera_contig_30_45
Type: TC
Location: 43742 - 45682 (+)
Gene ID: opera_contig_30_46
Type: CAZyme
Location: 45775 - 47022 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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