Cluster: SPMP03_bin.1_CGC28
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: SPMP03_bin.1
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_213307 | opera_contig_213307_306 | 335972 | 337420 | - | 2.A.66.2.9 |
| CAZyme | opera_contig_213307 | opera_contig_213307_307 | 337433 | 338392 | - | GT2 |
| CAZyme | opera_contig_213307 | opera_contig_213307_308 | 338415 | 339374 | - | GT2 |
| CAZyme | opera_contig_213307 | opera_contig_213307_309 | 339380 | 340387 | - | GT2 |
| pfam | opera_contig_213307 | opera_contig_213307_310 | 340389 | 341600 | - | Wzy_C |
| CAZyme | opera_contig_213307 | opera_contig_213307_311 | 341614 | 342591 | - | GT2 |
| CAZyme | opera_contig_213307 | opera_contig_213307_312 | 342606 | 343706 | - | GT4 |
| pfam | opera_contig_213307 | opera_contig_213307_313 | 343721 | 344725 | - | 3Beta_HSD | Epimerase | NAD_binding_4 | GDP_Man_Dehyd |
| TC | opera_contig_213307 | opera_contig_213307_314 | 344726 | 346138 | - | 9.B.18.1.2 |
Gene ID: opera_contig_213307_306
Type: TC
Location: 335972 - 337420 (-)
Type: TC
Location: 335972 - 337420 (-)
Gene ID: opera_contig_213307_307
Type: CAZyme
Location: 337433 - 338392 (-)
Type: CAZyme
Location: 337433 - 338392 (-)
Gene ID: opera_contig_213307_308
Type: CAZyme
Location: 338415 - 339374 (-)
Type: CAZyme
Location: 338415 - 339374 (-)
Gene ID: opera_contig_213307_309
Type: CAZyme
Location: 339380 - 340387 (-)
Type: CAZyme
Location: 339380 - 340387 (-)
Gene ID: opera_contig_213307_310
Type: pfam
Location: 340389 - 341600 (-)
Type: pfam
Location: 340389 - 341600 (-)
Gene ID: opera_contig_213307_311
Type: CAZyme
Location: 341614 - 342591 (-)
Type: CAZyme
Location: 341614 - 342591 (-)
Gene ID: opera_contig_213307_312
Type: CAZyme
Location: 342606 - 343706 (-)
Type: CAZyme
Location: 342606 - 343706 (-)
Gene ID: opera_contig_213307_313
Type: pfam
Location: 343721 - 344725 (-)
Type: pfam
Location: 343721 - 344725 (-)
Gene ID: opera_contig_213307_314
Type: TC
Location: 344726 - 346138 (-)
Type: TC
Location: 344726 - 346138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium hattorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.