Cluster: SPMP03_bin.1_CGC27
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP03_bin.1
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_213307 | opera_contig_213307_275 | 299873 | 302269 | + | GT35 |
| CAZyme | opera_contig_213307 | opera_contig_213307_276 | 302347 | 304203 | + | GH13_39 |
| pfam | opera_contig_213307 | opera_contig_213307_277 | 304350 | 304799 | + | NfeD |
| TC | opera_contig_213307 | opera_contig_213307_278 | 304815 | 305723 | + | 8.A.21.2.2 |
| pfam | opera_contig_213307 | opera_contig_213307_279 | 305818 | 306300 | + | DUF386 |
| TF | opera_contig_213307 | opera_contig_213307_280 | 306387 | 307532 | + | HTH_3 |
| TC | opera_contig_213307 | opera_contig_213307_281 | 307587 | 308966 | - | 1.A.26.1.3 |
| pfam | opera_contig_213307 | opera_contig_213307_282 | 309259 | 309909 | - | ABC2_membrane_5 |
| TC | opera_contig_213307 | opera_contig_213307_283 | 309906 | 310748 | - | 3.A.1.149.1 |
| TF | opera_contig_213307 | opera_contig_213307_284 | 310752 | 311123 | - | GntR |
| pfam | opera_contig_213307 | opera_contig_213307_285 | 311267 | 312706 | - | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| TC | opera_contig_213307 | opera_contig_213307_286 | 312840 | 313073 | - | 3.D.1.6.3 |
Gene ID: opera_contig_213307_275
Type: CAZyme
Location: 299873 - 302269 (+)
Type: CAZyme
Location: 299873 - 302269 (+)
Gene ID: opera_contig_213307_276
Type: CAZyme
Location: 302347 - 304203 (+)
Type: CAZyme
Location: 302347 - 304203 (+)
Gene ID: opera_contig_213307_277
Type: pfam
Location: 304350 - 304799 (+)
Type: pfam
Location: 304350 - 304799 (+)
Gene ID: opera_contig_213307_278
Type: TC
Location: 304815 - 305723 (+)
Type: TC
Location: 304815 - 305723 (+)
Gene ID: opera_contig_213307_279
Type: pfam
Location: 305818 - 306300 (+)
Type: pfam
Location: 305818 - 306300 (+)
Gene ID: opera_contig_213307_280
Type: TF
Location: 306387 - 307532 (+)
Type: TF
Location: 306387 - 307532 (+)
Gene ID: opera_contig_213307_281
Type: TC
Location: 307587 - 308966 (-)
Type: TC
Location: 307587 - 308966 (-)
Gene ID: opera_contig_213307_282
Type: pfam
Location: 309259 - 309909 (-)
Type: pfam
Location: 309259 - 309909 (-)
Gene ID: opera_contig_213307_283
Type: TC
Location: 309906 - 310748 (-)
Type: TC
Location: 309906 - 310748 (-)
Gene ID: opera_contig_213307_284
Type: TF
Location: 310752 - 311123 (-)
Type: TF
Location: 310752 - 311123 (-)
Gene ID: opera_contig_213307_285
Type: pfam
Location: 311267 - 312706 (-)
Type: pfam
Location: 311267 - 312706 (-)
Gene ID: opera_contig_213307_286
Type: TC
Location: 312840 - 313073 (-)
Type: TC
Location: 312840 - 313073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium hattorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.