Cluster: SPMP03_bin.1_CGC26
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP03_bin.1
- CGC Family ID: CGCFAM_01236
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_213307 | opera_contig_213307_161 | 173770 | 175245 | - | GH32 |
| STP | opera_contig_213307 | opera_contig_213307_162 | 175270 | 176943 | - | SBP_bac_1 |
| TC | opera_contig_213307 | opera_contig_213307_163 | 177019 | 177924 | - | 3.A.1.1.10 |
| TC | opera_contig_213307 | opera_contig_213307_164 | 177938 | 178885 | - | 3.A.1.1.10 |
| TF | opera_contig_213307 | opera_contig_213307_165 | 179233 | 180288 | + | LacI |
| TC | opera_contig_213307 | opera_contig_213307_166 | 180306 | 180956 | + | 9.B.28.1.2 |
| NULL(UNKNOWN) | opera_contig_213307 | opera_contig_213307_167 | 180919 | 181560 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | opera_contig_213307 | opera_contig_213307_168 | 181597 | 182529 | + | PfkB |
| CAZyme | opera_contig_213307 | opera_contig_213307_169 | 182533 | 184362 | + | GH13_4 |
| TF | opera_contig_213307 | opera_contig_213307_170 | 185002 | 185859 | - | HTH_AraC | HTH_AraC |
| CAZyme | opera_contig_213307 | opera_contig_213307_171 | 185989 | 188250 | + | GT35 |
Gene ID: opera_contig_213307_161
Type: CAZyme
Location: 173770 - 175245 (-)
Type: CAZyme
Location: 173770 - 175245 (-)
Gene ID: opera_contig_213307_162
Type: STP
Location: 175270 - 176943 (-)
Type: STP
Location: 175270 - 176943 (-)
Gene ID: opera_contig_213307_163
Type: TC
Location: 177019 - 177924 (-)
Type: TC
Location: 177019 - 177924 (-)
Gene ID: opera_contig_213307_164
Type: TC
Location: 177938 - 178885 (-)
Type: TC
Location: 177938 - 178885 (-)
Gene ID: opera_contig_213307_165
Type: TF
Location: 179233 - 180288 (+)
Type: TF
Location: 179233 - 180288 (+)
Gene ID: opera_contig_213307_166
Type: TC
Location: 180306 - 180956 (+)
Type: TC
Location: 180306 - 180956 (+)
Gene ID: opera_contig_213307_167
Type:
Location: 180919 - 181560 (+)
Type:
Location: 180919 - 181560 (+)
Gene ID: opera_contig_213307_168
Type: STP
Location: 181597 - 182529 (+)
Type: STP
Location: 181597 - 182529 (+)
Gene ID: opera_contig_213307_169
Type: CAZyme
Location: 182533 - 184362 (+)
Type: CAZyme
Location: 182533 - 184362 (+)
Gene ID: opera_contig_213307_170
Type: TF
Location: 185002 - 185859 (-)
Type: TF
Location: 185002 - 185859 (-)
Gene ID: opera_contig_213307_171
Type: CAZyme
Location: 185989 - 188250 (+)
Type: CAZyme
Location: 185989 - 188250 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium hattorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.