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Cluster: SPMP03_bin.1_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_213307 opera_contig_213307_76 75971 77314 + 2.A.66.1.33
NULL(UNKNOWN) opera_contig_213307 opera_contig_213307_77 77746 78336 + NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_213307 opera_contig_213307_78 78435 79139 + 3.A.1.125.2
TC opera_contig_213307 opera_contig_213307_79 79145 82456 + 3.A.1.137.2
CAZyme opera_contig_213307 opera_contig_213307_80 82624 83370 - GT51
TC opera_contig_213307 opera_contig_213307_81 83566 84204 - 2.A.115.2.12
pfam opera_contig_213307 opera_contig_213307_82 84305 85240 - SRP54 | cobW
TC opera_contig_213307 opera_contig_213307_83 85423 86304 - 2.A.115.1.1
TC opera_contig_213307 opera_contig_213307_84 86340 87557 - 2.A.103.1.4
Gene ID: opera_contig_213307_76
Type: TC
Location: 75971 - 77314 (+)
Gene ID: opera_contig_213307_77
Type:
Location: 77746 - 78336 (+)
Gene ID: opera_contig_213307_78
Type: TC
Location: 78435 - 79139 (+)
Gene ID: opera_contig_213307_79
Type: TC
Location: 79145 - 82456 (+)
Gene ID: opera_contig_213307_80
Type: CAZyme
Location: 82624 - 83370 (-)
Gene ID: opera_contig_213307_81
Type: TC
Location: 83566 - 84204 (-)
Gene ID: opera_contig_213307_82
Type: pfam
Location: 84305 - 85240 (-)
Gene ID: opera_contig_213307_83
Type: TC
Location: 85423 - 86304 (-)
Gene ID: opera_contig_213307_84
Type: TC
Location: 86340 - 87557 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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