Cluster: SPMP03_bin.1_CGC22
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP03_bin.1
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_213306 | opera_contig_213306_454 | 475559 | 476953 | - | 3.A.2.1.5 |
| TC | opera_contig_213306 | opera_contig_213306_455 | 477115 | 477963 | - | 3.A.2.1.5 |
| TC | opera_contig_213306 | opera_contig_213306_456 | 477982 | 479502 | - | 3.A.2.1.5 |
| pfam | opera_contig_213306 | opera_contig_213306_457 | 479550 | 480089 | - | OSCP |
| pfam | opera_contig_213306 | opera_contig_213306_458 | 480086 | 480592 | - | ATP-synt_B |
| TC | opera_contig_213306 | opera_contig_213306_459 | 480632 | 480913 | - | 3.A.2.1.5 |
| TC | opera_contig_213306 | opera_contig_213306_460 | 480956 | 481699 | - | 3.A.2.1.5 |
| pfam | opera_contig_213306 | opera_contig_213306_461 | 481703 | 482200 | - | ATP-synt_I |
| pfam | opera_contig_213306 | opera_contig_213306_462 | 482218 | 482478 | - | ATPase_gene1 |
| CAZyme | opera_contig_213306 | opera_contig_213306_463 | 482794 | 484212 | - | GT5 |
| pfam | opera_contig_213306 | opera_contig_213306_464 | 484340 | 485467 | - | NTP_transferase | Hexapep_GlmU |
| pfam | opera_contig_213306 | opera_contig_213306_465 | 485461 | 486654 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | opera_contig_213306 | opera_contig_213306_466 | 486735 | 489008 | - | CBM48 | GH13_9 |
| pfam | opera_contig_213306 | opera_contig_213306_467 | 489295 | 490353 | - | DUF348 | 3D | G5 |
| CAZyme | opera_contig_213306 | opera_contig_213306_468 | 490942 | 491595 | + | GH25 |
Gene ID: opera_contig_213306_454
Type: TC
Location: 475559 - 476953 (-)
Type: TC
Location: 475559 - 476953 (-)
Gene ID: opera_contig_213306_455
Type: TC
Location: 477115 - 477963 (-)
Type: TC
Location: 477115 - 477963 (-)
Gene ID: opera_contig_213306_456
Type: TC
Location: 477982 - 479502 (-)
Type: TC
Location: 477982 - 479502 (-)
Gene ID: opera_contig_213306_457
Type: pfam
Location: 479550 - 480089 (-)
Type: pfam
Location: 479550 - 480089 (-)
Gene ID: opera_contig_213306_458
Type: pfam
Location: 480086 - 480592 (-)
Type: pfam
Location: 480086 - 480592 (-)
Gene ID: opera_contig_213306_459
Type: TC
Location: 480632 - 480913 (-)
Type: TC
Location: 480632 - 480913 (-)
Gene ID: opera_contig_213306_460
Type: TC
Location: 480956 - 481699 (-)
Type: TC
Location: 480956 - 481699 (-)
Gene ID: opera_contig_213306_461
Type: pfam
Location: 481703 - 482200 (-)
Type: pfam
Location: 481703 - 482200 (-)
Gene ID: opera_contig_213306_462
Type: pfam
Location: 482218 - 482478 (-)
Type: pfam
Location: 482218 - 482478 (-)
Gene ID: opera_contig_213306_463
Type: CAZyme
Location: 482794 - 484212 (-)
Type: CAZyme
Location: 482794 - 484212 (-)
Gene ID: opera_contig_213306_464
Type: pfam
Location: 484340 - 485467 (-)
Type: pfam
Location: 484340 - 485467 (-)
Gene ID: opera_contig_213306_465
Type: pfam
Location: 485461 - 486654 (-)
Type: pfam
Location: 485461 - 486654 (-)
Gene ID: opera_contig_213306_466
Type: CAZyme
Location: 486735 - 489008 (-)
Type: CAZyme
Location: 486735 - 489008 (-)
Gene ID: opera_contig_213306_467
Type: pfam
Location: 489295 - 490353 (-)
Type: pfam
Location: 489295 - 490353 (-)
Gene ID: opera_contig_213306_468
Type: CAZyme
Location: 490942 - 491595 (+)
Type: CAZyme
Location: 490942 - 491595 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium hattorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.