Cluster: SPMP03_bin.1_CGC19
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP03_bin.1
- CGC Family ID: CGCFAM_03646
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_213305 | opera_contig_213305_1152 | 1249965 | 1253096 | - | 3.A.7.17.1 |
| STP | opera_contig_213305 | opera_contig_213305_1153 | 1253310 | 1254242 | - | PfkB |
| TC | opera_contig_213305 | opera_contig_213305_1154 | 1254420 | 1255616 | - | 2.A.37.2.2 |
| pfam | opera_contig_213305 | opera_contig_213305_1155 | 1255943 | 1256227 | + | Ribosomal_S6 |
| TC | opera_contig_213305 | opera_contig_213305_1156 | 1256258 | 1256737 | + | 3.A.7.19.1 |
| pfam | opera_contig_213305 | opera_contig_213305_1157 | 1256784 | 1257041 | + | Ribosomal_S18 |
| TF | opera_contig_213305 | opera_contig_213305_1158 | 1257444 | 1258463 | + | LacI |
| TC | opera_contig_213305 | opera_contig_213305_1159 | 1258523 | 1259872 | + | 3.A.1.1.45 |
| TC | opera_contig_213305 | opera_contig_213305_1160 | 1259959 | 1260810 | + | 3.A.1.1.45 |
| TC | opera_contig_213305 | opera_contig_213305_1161 | 1260810 | 1261652 | + | 3.A.1.1.45 |
| CAZyme | opera_contig_213305 | opera_contig_213305_1162 | 1261671 | 1263143 | + | GH77 |
Gene ID: opera_contig_213305_1152
Type: TC
Location: 1249965 - 1253096 (-)
Type: TC
Location: 1249965 - 1253096 (-)
Gene ID: opera_contig_213305_1153
Type: STP
Location: 1253310 - 1254242 (-)
Type: STP
Location: 1253310 - 1254242 (-)
Gene ID: opera_contig_213305_1154
Type: TC
Location: 1254420 - 1255616 (-)
Type: TC
Location: 1254420 - 1255616 (-)
Gene ID: opera_contig_213305_1155
Type: pfam
Location: 1255943 - 1256227 (+)
Type: pfam
Location: 1255943 - 1256227 (+)
Gene ID: opera_contig_213305_1156
Type: TC
Location: 1256258 - 1256737 (+)
Type: TC
Location: 1256258 - 1256737 (+)
Gene ID: opera_contig_213305_1157
Type: pfam
Location: 1256784 - 1257041 (+)
Type: pfam
Location: 1256784 - 1257041 (+)
Gene ID: opera_contig_213305_1158
Type: TF
Location: 1257444 - 1258463 (+)
Type: TF
Location: 1257444 - 1258463 (+)
Gene ID: opera_contig_213305_1159
Type: TC
Location: 1258523 - 1259872 (+)
Type: TC
Location: 1258523 - 1259872 (+)
Gene ID: opera_contig_213305_1160
Type: TC
Location: 1259959 - 1260810 (+)
Type: TC
Location: 1259959 - 1260810 (+)
Gene ID: opera_contig_213305_1161
Type: TC
Location: 1260810 - 1261652 (+)
Type: TC
Location: 1260810 - 1261652 (+)
Gene ID: opera_contig_213305_1162
Type: CAZyme
Location: 1261671 - 1263143 (+)
Type: CAZyme
Location: 1261671 - 1263143 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium hattorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.