Cluster: RoseG_2017_ERR1600432_bin.4_CGC7
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: RoseG_2017_ERR1600432_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RoseG_2017_ERR1600432_bin.4_k141_4517 | RoseG_2017_ERR1600432_bin.4_k141_4517_29 | 34565 | 35938 | - | 2.A.1.4.2 |
| NULL(UNKNOWN) | RoseG_2017_ERR1600432_bin.4_k141_4517 | RoseG_2017_ERR1600432_bin.4_k141_4517_30 | 36611 | 36823 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | RoseG_2017_ERR1600432_bin.4_k141_4517 | RoseG_2017_ERR1600432_bin.4_k141_4517_31 | 36934 | 37725 | - | CN_hydrolase |
| CAZyme | RoseG_2017_ERR1600432_bin.4_k141_4517 | RoseG_2017_ERR1600432_bin.4_k141_4517_32 | 38043 | 38846 | + | CE4 |
| pfam | RoseG_2017_ERR1600432_bin.4_k141_4517 | RoseG_2017_ERR1600432_bin.4_k141_4517_33 | 38858 | 39796 | + | NAGPA |
| NULL(UNKNOWN) | RoseG_2017_ERR1600432_bin.4_k141_4517 | RoseG_2017_ERR1600432_bin.4_k141_4517_34 | 39805 | 40746 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | RoseG_2017_ERR1600432_bin.4_k141_4517 | RoseG_2017_ERR1600432_bin.4_k141_4517_35 | 40816 | 41988 | + | GT9 |
| NULL(UNKNOWN) | RoseG_2017_ERR1600432_bin.4_k141_4517 | RoseG_2017_ERR1600432_bin.4_k141_4517_36 | 41975 | 42301 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RoseG_2017_ERR1600432_bin.4_k141_4517 | RoseG_2017_ERR1600432_bin.4_k141_4517_37 | 42829 | 44181 | + | 3.B.1.1.1 |
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_4517_29
Type: TC
Location: 34565 - 35938 (-)
Type: TC
Location: 34565 - 35938 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_4517_30
Type:
Location: 36611 - 36823 (+)
Type:
Location: 36611 - 36823 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_4517_31
Type: pfam
Location: 36934 - 37725 (-)
Type: pfam
Location: 36934 - 37725 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_4517_32
Type: CAZyme
Location: 38043 - 38846 (+)
Type: CAZyme
Location: 38043 - 38846 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_4517_33
Type: pfam
Location: 38858 - 39796 (+)
Type: pfam
Location: 38858 - 39796 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_4517_34
Type:
Location: 39805 - 40746 (+)
Type:
Location: 39805 - 40746 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_4517_35
Type: CAZyme
Location: 40816 - 41988 (+)
Type: CAZyme
Location: 40816 - 41988 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_4517_36
Type:
Location: 41975 - 42301 (+)
Type:
Location: 41975 - 42301 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_4517_37
Type: TC
Location: 42829 - 44181 (+)
Type: TC
Location: 42829 - 44181 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.