Cluster: RoseG_2017_ERR1600432_bin.4_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RoseG_2017_ERR1600432_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RoseG_2017_ERR1600432_bin.4_k141_3733 | RoseG_2017_ERR1600432_bin.4_k141_3733_110 | 108416 | 109525 | - | GT28 |
| pfam | RoseG_2017_ERR1600432_bin.4_k141_3733 | RoseG_2017_ERR1600432_bin.4_k141_3733_111 | 109525 | 110895 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | RoseG_2017_ERR1600432_bin.4_k141_3733 | RoseG_2017_ERR1600432_bin.4_k141_3733_112 | 110980 | 111966 | - | 9.B.146.1.6 |
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3733_110
Type: CAZyme
Location: 108416 - 109525 (-)
Type: CAZyme
Location: 108416 - 109525 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3733_111
Type: pfam
Location: 109525 - 110895 (-)
Type: pfam
Location: 109525 - 110895 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3733_112
Type: TC
Location: 110980 - 111966 (-)
Type: TC
Location: 110980 - 111966 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.