Cluster: RoseG_2017_ERR1600432_bin.4_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RoseG_2017_ERR1600432_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RoseG_2017_ERR1600432_bin.4_k141_3733 | RoseG_2017_ERR1600432_bin.4_k141_3733_57 | 53943 | 56324 | - | 8.A.7.1.2 |
| STP | RoseG_2017_ERR1600432_bin.4_k141_3733 | RoseG_2017_ERR1600432_bin.4_k141_3733_58 | 56392 | 57042 | - | NUDIX |
| pfam | RoseG_2017_ERR1600432_bin.4_k141_3733 | RoseG_2017_ERR1600432_bin.4_k141_3733_59 | 57289 | 58497 | - | tRNA-synt_1b | SYY_C-terminal |
| CAZyme | RoseG_2017_ERR1600432_bin.4_k141_3733 | RoseG_2017_ERR1600432_bin.4_k141_3733_60 | 58660 | 60750 | + | GT51 |
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3733_57
Type: TC
Location: 53943 - 56324 (-)
Type: TC
Location: 53943 - 56324 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3733_58
Type: STP
Location: 56392 - 57042 (-)
Type: STP
Location: 56392 - 57042 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3733_59
Type: pfam
Location: 57289 - 58497 (-)
Type: pfam
Location: 57289 - 58497 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3733_60
Type: CAZyme
Location: 58660 - 60750 (+)
Type: CAZyme
Location: 58660 - 60750 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.