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Cluster: RoseG_2017_ERR1600432_bin.4_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_14 17710 19263 - 3.A.1.5.3
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_15 19596 20411 - 3.A.1.5.12
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_16 20404 21201 - 3.A.1.5.25
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_17 21214 22782 - 3.A.1.5.3
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_18 22932 23753 - 3.A.1.5.11
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_19 23753 24691 - 3.A.1.5.11
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_20 25418 26749 - 2.A.3.2.1
pfam RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_21 27366 28793 - Lyase_1 | ASL_C2
pfam RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_22 28793 30004 - Arginosuc_synth | Arginosuc_syn_C
CAZyme RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_23 30268 31074 - GT51
pfam RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_24 31462 31740 + Trns_repr_metal
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_25 31928 32188 - 8.A.8.1.1
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_26 32307 34034 - 8.A.7.1.1
pfam RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_27 34372 35205 + DAP_epimerase | DAP_epimerase | Pro_racemase
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_28 35267 36604 + 2.A.35.1.2
STP RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_29 36739 37653 + PfkB
TC RoseG_2017_ERR1600432_bin.4_k141_3146 RoseG_2017_ERR1600432_bin.4_k141_3146_30 37687 39669 + 4.A.2.1.4
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_14
Type: TC
Location: 17710 - 19263 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_15
Type: TC
Location: 19596 - 20411 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_16
Type: TC
Location: 20404 - 21201 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_17
Type: TC
Location: 21214 - 22782 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_18
Type: TC
Location: 22932 - 23753 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_19
Type: TC
Location: 23753 - 24691 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_20
Type: TC
Location: 25418 - 26749 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_21
Type: pfam
Location: 27366 - 28793 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_22
Type: pfam
Location: 28793 - 30004 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_23
Type: CAZyme
Location: 30268 - 31074 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_24
Type: pfam
Location: 31462 - 31740 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_25
Type: TC
Location: 31928 - 32188 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_26
Type: TC
Location: 32307 - 34034 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_27
Type: pfam
Location: 34372 - 35205 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_28
Type: TC
Location: 35267 - 36604 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_29
Type: STP
Location: 36739 - 37653 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3146_30
Type: TC
Location: 37687 - 39669 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Veillonellaceae
→
Genus
Veillonella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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