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Cluster: RoseG_2017_ERR1600432_bin.4_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme RoseG_2017_ERR1600432_bin.4_k141_2232 RoseG_2017_ERR1600432_bin.4_k141_2232_1 735 1595 + CE4
pfam RoseG_2017_ERR1600432_bin.4_k141_2232 RoseG_2017_ERR1600432_bin.4_k141_2232_2 1604 2098 + MoCF_biosynth
TF RoseG_2017_ERR1600432_bin.4_k141_2232 RoseG_2017_ERR1600432_bin.4_k141_2232_3 2319 2771 + Rrf2
TC RoseG_2017_ERR1600432_bin.4_k141_2232 RoseG_2017_ERR1600432_bin.4_k141_2232_4 2835 4223 + 3.D.4.3.2
TC RoseG_2017_ERR1600432_bin.4_k141_2232 RoseG_2017_ERR1600432_bin.4_k141_2232_5 4214 5233 + 3.D.4.3.2
TC RoseG_2017_ERR1600432_bin.4_k141_2232 RoseG_2017_ERR1600432_bin.4_k141_2232_6 5423 9007 + 3.A.1.129.1
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_2232_1
Type: CAZyme
Location: 735 - 1595 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_2232_2
Type: pfam
Location: 1604 - 2098 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_2232_3
Type: TF
Location: 2319 - 2771 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_2232_4
Type: TC
Location: 2835 - 4223 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_2232_5
Type: TC
Location: 4214 - 5233 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_2232_6
Type: TC
Location: 5423 - 9007 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Veillonellaceae
→
Genus
Veillonella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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