Cluster: RoseG_2017_ERR1600432_bin.4_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RoseG_2017_ERR1600432_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RoseG_2017_ERR1600432_bin.4_k141_6408 | RoseG_2017_ERR1600432_bin.4_k141_6408_11 | 13683 | 15317 | - | GH18 |
| pfam | RoseG_2017_ERR1600432_bin.4_k141_6408 | RoseG_2017_ERR1600432_bin.4_k141_6408_12 | 15471 | 16295 | + | LGT |
| STP | RoseG_2017_ERR1600432_bin.4_k141_6408 | RoseG_2017_ERR1600432_bin.4_k141_6408_13 | 16430 | 17746 | - | Pyr_redox_2 |
| TC | RoseG_2017_ERR1600432_bin.4_k141_6408 | RoseG_2017_ERR1600432_bin.4_k141_6408_14 | 17739 | 19673 | - | 3.A.7.7.1 |
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_6408_11
Type: CAZyme
Location: 13683 - 15317 (-)
Type: CAZyme
Location: 13683 - 15317 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_6408_12
Type: pfam
Location: 15471 - 16295 (+)
Type: pfam
Location: 15471 - 16295 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_6408_13
Type: STP
Location: 16430 - 17746 (-)
Type: STP
Location: 16430 - 17746 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_6408_14
Type: TC
Location: 17739 - 19673 (-)
Type: TC
Location: 17739 - 19673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.