Cluster: RoseG_2017_ERR1600432_bin.4_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RoseG_2017_ERR1600432_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RoseG_2017_ERR1600432_bin.4_k141_5802 | RoseG_2017_ERR1600432_bin.4_k141_5802_9 | 15465 | 17081 | + | GT83 |
| pfam | RoseG_2017_ERR1600432_bin.4_k141_5802 | RoseG_2017_ERR1600432_bin.4_k141_5802_10 | 17131 | 17499 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | RoseG_2017_ERR1600432_bin.4_k141_5802 | RoseG_2017_ERR1600432_bin.4_k141_5802_11 | 17570 | 18076 | - | Ribosomal_L10 |
| TC | RoseG_2017_ERR1600432_bin.4_k141_5802 | RoseG_2017_ERR1600432_bin.4_k141_5802_12 | 18251 | 18961 | - | 1.C.82.1.1 |
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_5802_9
Type: CAZyme
Location: 15465 - 17081 (+)
Type: CAZyme
Location: 15465 - 17081 (+)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_5802_10
Type: pfam
Location: 17131 - 17499 (-)
Type: pfam
Location: 17131 - 17499 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_5802_11
Type: pfam
Location: 17570 - 18076 (-)
Type: pfam
Location: 17570 - 18076 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_5802_12
Type: TC
Location: 18251 - 18961 (-)
Type: TC
Location: 18251 - 18961 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.