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Cluster: Rep_998_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_998_c_48 Rep_998_c_48_6 4074 5006 - 9.B.62.1.1
TC Rep_998_c_48 Rep_998_c_48_7 5011 5391 - 9.B.62.1.5
TC Rep_998_c_48 Rep_998_c_48_8 5423 6355 - 1.B.76.1.5
CAZyme Rep_998_c_48 Rep_998_c_48_9 6366 8186 - AA1
NULL(UNKNOWN) Rep_998_c_48 Rep_998_c_48_10 8474 8704 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_998_c_48 Rep_998_c_48_11 8994 9320 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_998_c_48 Rep_998_c_48_12 9543 12173 - 3.A.3.6.4
TF Rep_998_c_48 Rep_998_c_48_13 12253 12711 + MerR
TC Rep_998_c_48 Rep_998_c_48_14 13511 14392 + 2.A.59.2.1
Gene ID: Rep_998_c_48_6
Type: TC
Location: 4074 - 5006 (-)
Gene ID: Rep_998_c_48_7
Type: TC
Location: 5011 - 5391 (-)
Gene ID: Rep_998_c_48_8
Type: TC
Location: 5423 - 6355 (-)
Gene ID: Rep_998_c_48_9
Type: CAZyme
Location: 6366 - 8186 (-)
Gene ID: Rep_998_c_48_10
Type:
Location: 8474 - 8704 (+)
Gene ID: Rep_998_c_48_11
Type:
Location: 8994 - 9320 (+)
Gene ID: Rep_998_c_48_12
Type: TC
Location: 9543 - 12173 (-)
Gene ID: Rep_998_c_48_13
Type: TF
Location: 12253 - 12711 (+)
Gene ID: Rep_998_c_48_14
Type: TC
Location: 13511 - 14392 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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