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Cluster: Rep_998_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_998_c_21 Rep_998_c_21_8 6755 7954 - 3.A.15.2.1
TC Rep_998_c_21 Rep_998_c_21_9 7947 9329 - 3.A.15.2.1
TC Rep_998_c_21 Rep_998_c_21_10 9319 9771 - 3.A.15.2.1
pfam Rep_998_c_21 Rep_998_c_21_11 9949 10845 - QRPTase_C | QRPTase_N
pfam Rep_998_c_21 Rep_998_c_21_12 11044 11595 + Amidase_2
TC Rep_998_c_21 Rep_998_c_21_13 11612 12466 + 9.B.125.1.1
CAZyme Rep_998_c_21 Rep_998_c_21_14 12448 13407 - GH43_26
TC Rep_998_c_21 Rep_998_c_21_15 13404 14816 - 2.A.2.3.4
TC Rep_998_c_21 Rep_998_c_21_16 15016 16371 - 2.A.3.1.3
Gene ID: Rep_998_c_21_8
Type: TC
Location: 6755 - 7954 (-)
Gene ID: Rep_998_c_21_9
Type: TC
Location: 7947 - 9329 (-)
Gene ID: Rep_998_c_21_10
Type: TC
Location: 9319 - 9771 (-)
Gene ID: Rep_998_c_21_11
Type: pfam
Location: 9949 - 10845 (-)
Gene ID: Rep_998_c_21_12
Type: pfam
Location: 11044 - 11595 (+)
Gene ID: Rep_998_c_21_13
Type: TC
Location: 11612 - 12466 (+)
Gene ID: Rep_998_c_21_14
Type: CAZyme
Location: 12448 - 13407 (-)
Gene ID: Rep_998_c_21_15
Type: TC
Location: 13404 - 14816 (-)
Gene ID: Rep_998_c_21_16
Type: TC
Location: 15016 - 16371 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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