dbCAN Logo

Cluster: Rep_998_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_998_c_66 Rep_998_c_66_1 3 116 + 3.A.1.5.39
TC Rep_998_c_66 Rep_998_c_66_2 129 1115 + 3.A.1.5.27
TC Rep_998_c_66 Rep_998_c_66_3 1105 2127 + 3.A.1.5.27
pfam Rep_998_c_66 Rep_998_c_66_4 2644 3228 + CBP_BcsO
STP Rep_998_c_66 Rep_998_c_66_5 3219 4022 + CbiA
CAZyme Rep_998_c_66 Rep_998_c_66_6 4077 6188 + GT2
TC Rep_998_c_66 Rep_998_c_66_7 6296 8767 + 4.D.3.1.6
TC Rep_998_c_66 Rep_998_c_66_8 8779 12462 + 1.B.55.3.1
Gene ID: Rep_998_c_66_1
Type: TC
Location: 3 - 116 (+)
Gene ID: Rep_998_c_66_2
Type: TC
Location: 129 - 1115 (+)
Gene ID: Rep_998_c_66_3
Type: TC
Location: 1105 - 2127 (+)
Gene ID: Rep_998_c_66_4
Type: pfam
Location: 2644 - 3228 (+)
Gene ID: Rep_998_c_66_5
Type: STP
Location: 3219 - 4022 (+)
Gene ID: Rep_998_c_66_6
Type: CAZyme
Location: 4077 - 6188 (+)
Gene ID: Rep_998_c_66_7
Type: TC
Location: 6296 - 8767 (+)
Gene ID: Rep_998_c_66_8
Type: TC
Location: 8779 - 12462 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List