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Cluster: Rep_990_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_990_c_2 Rep_990_c_2_65 66039 67736 + GH13_18
TC Rep_990_c_2 Rep_990_c_2_66 67751 69043 + 3.A.1.1.46
TC Rep_990_c_2 Rep_990_c_2_67 69066 69947 + 3.A.1.1.46
TC Rep_990_c_2 Rep_990_c_2_68 69934 70776 + 3.A.1.1.46
pfam Rep_990_c_2 Rep_990_c_2_69 70805 71857 + ADH_zinc_N
pfam Rep_990_c_2 Rep_990_c_2_70 71875 72663 + AP_endonuc_2
CAZyme Rep_990_c_2 Rep_990_c_2_71 72678 73733 + GH179
CAZyme Rep_990_c_2 Rep_990_c_2_72 73727 76006 + GH65
pfam Rep_990_c_2 Rep_990_c_2_73 75996 76661 + Hydrolase | HAD_2
TC Rep_990_c_2 Rep_990_c_2_74 76675 77757 + 3.A.1.1.46
TC Rep_990_c_2 Rep_990_c_2_75 77824 78738 + 1.B.21.1.1
Gene ID: Rep_990_c_2_65
Type: CAZyme
Location: 66039 - 67736 (+)
Gene ID: Rep_990_c_2_66
Type: TC
Location: 67751 - 69043 (+)
Gene ID: Rep_990_c_2_67
Type: TC
Location: 69066 - 69947 (+)
Gene ID: Rep_990_c_2_68
Type: TC
Location: 69934 - 70776 (+)
Gene ID: Rep_990_c_2_69
Type: pfam
Location: 70805 - 71857 (+)
Gene ID: Rep_990_c_2_70
Type: pfam
Location: 71875 - 72663 (+)
Gene ID: Rep_990_c_2_71
Type: CAZyme
Location: 72678 - 73733 (+)
Gene ID: Rep_990_c_2_72
Type: CAZyme
Location: 73727 - 76006 (+)
Gene ID: Rep_990_c_2_73
Type: pfam
Location: 75996 - 76661 (+)
Gene ID: Rep_990_c_2_74
Type: TC
Location: 76675 - 77757 (+)
Gene ID: Rep_990_c_2_75
Type: TC
Location: 77824 - 78738 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_990_c_2_69 vegetarian > vegan 1.10177 0.04130
Rep_990_c_2_70 vegetarian > vegan 1.86425 0.04130
Rep_990_c_2_74 vegetarian > omnivore 1.02269 0.03781
Rep_990_c_2_75 vegetarian > vegan 1.53762 0.04130

🧭 Explore Read Mapping of CGC

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