dbCAN Logo

Cluster: Rep_990_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_990_c_80 Rep_990_c_80_5 4169 6691 + GT51
pfam Rep_990_c_80 Rep_990_c_80_6 7036 7608 + Fimbrial
pfam Rep_990_c_80 Rep_990_c_80_7 7651 8364 + PapD_N | PapD_C
TC Rep_990_c_80 Rep_990_c_80_8 8385 10862 + 1.B.11.3.6
pfam Rep_990_c_80 Rep_990_c_80_9 10874 11872 + Fimbrial
TC Rep_990_c_80 Rep_990_c_80_10 12078 14333 + 1.B.14.1.2
TC Rep_990_c_80 Rep_990_c_80_11 14384 15181 + 3.A.1.14.3
TC Rep_990_c_80 Rep_990_c_80_12 15181 16068 + 3.A.1.14.3
TC Rep_990_c_80 Rep_990_c_80_13 16065 18047 + 3.A.1.14.3
Gene ID: Rep_990_c_80_5
Type: CAZyme
Location: 4169 - 6691 (+)
Gene ID: Rep_990_c_80_6
Type: pfam
Location: 7036 - 7608 (+)
Gene ID: Rep_990_c_80_7
Type: pfam
Location: 7651 - 8364 (+)
Gene ID: Rep_990_c_80_8
Type: TC
Location: 8385 - 10862 (+)
Gene ID: Rep_990_c_80_9
Type: pfam
Location: 10874 - 11872 (+)
Gene ID: Rep_990_c_80_10
Type: TC
Location: 12078 - 14333 (+)
Gene ID: Rep_990_c_80_11
Type: TC
Location: 14384 - 15181 (+)
Gene ID: Rep_990_c_80_12
Type: TC
Location: 15181 - 16068 (+)
Gene ID: Rep_990_c_80_13
Type: TC
Location: 16065 - 18047 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List