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Cluster: Rep_990_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_990_c_22 Rep_990_c_22_37 38920 40140 - GT4
pfam Rep_990_c_22 Rep_990_c_22_38 40137 41417 - PS_pyruv_trans
TC Rep_990_c_22 Rep_990_c_22_39 41435 42913 - 2.A.66.2.7
TC Rep_990_c_22 Rep_990_c_22_40 42915 44309 - 9.B.18.1.1
pfam Rep_990_c_22 Rep_990_c_22_41 44424 45794 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam Rep_990_c_22 Rep_990_c_22_42 45902 47338 - NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
CAZyme Rep_990_c_22 Rep_990_c_22_43 47342 48565 - GT4
Gene ID: Rep_990_c_22_37
Type: CAZyme
Location: 38920 - 40140 (-)
Gene ID: Rep_990_c_22_38
Type: pfam
Location: 40137 - 41417 (-)
Gene ID: Rep_990_c_22_39
Type: TC
Location: 41435 - 42913 (-)
Gene ID: Rep_990_c_22_40
Type: TC
Location: 42915 - 44309 (-)
Gene ID: Rep_990_c_22_41
Type: pfam
Location: 44424 - 45794 (-)
Gene ID: Rep_990_c_22_42
Type: pfam
Location: 45902 - 47338 (-)
Gene ID: Rep_990_c_22_43
Type: CAZyme
Location: 47342 - 48565 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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