dbCAN Logo

Cluster: Rep_990_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_990_c_17 Rep_990_c_17_11 11584 12834 + 2.A.66.2.3
CAZyme Rep_990_c_17 Rep_990_c_17_12 12831 13910 + GT56
TC Rep_990_c_17 Rep_990_c_17_13 13907 15259 + 9.B.128.1.1
CAZyme Rep_990_c_17 Rep_990_c_17_14 15272 16012 + GT26
TC Rep_990_c_17 Rep_990_c_17_15 16210 17595 + 2.A.3.1.15
Gene ID: Rep_990_c_17_11
Type: TC
Location: 11584 - 12834 (+)
Gene ID: Rep_990_c_17_12
Type: CAZyme
Location: 12831 - 13910 (+)
Gene ID: Rep_990_c_17_13
Type: TC
Location: 13907 - 15259 (+)
Gene ID: Rep_990_c_17_14
Type: CAZyme
Location: 15272 - 16012 (+)
Gene ID: Rep_990_c_17_15
Type: TC
Location: 16210 - 17595 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_990_c_17_14 vegetarian > vegan 1.42416 0.04130

🧭 Explore Read Mapping of CGC

← Back to Cluster List