Cluster: Rep_98_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_98
- CGC Family ID: CGCFAM_00837
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_98_c_17 | Rep_98_c_17_13 | 14542 | 16131 | - | 9.B.174.1.1 |
| pfam | Rep_98_c_17 | Rep_98_c_17_14 | 16153 | 16596 | - | dCMP_cyt_deam_1 | MafB19-deam |
| sulfatase | Rep_98_c_17 | Rep_98_c_17_15 | 16583 | 17641 | - | S1_16 |
| CAZyme | Rep_98_c_17 | Rep_98_c_17_16 | 17845 | 18786 | - | GT2 |
| TC | Rep_98_c_17 | Rep_98_c_17_17 | 18823 | 19836 | - | 8.A.21.2.2 |
| pfam | Rep_98_c_17 | Rep_98_c_17_18 | 19874 | 20329 | - | NfeD |
| TC | Rep_98_c_17 | Rep_98_c_17_19 | 20375 | 21037 | - | 9.B.18.1.2 |
Gene ID: Rep_98_c_17_13
Type: TC
Location: 14542 - 16131 (-)
Type: TC
Location: 14542 - 16131 (-)
Gene ID: Rep_98_c_17_14
Type: pfam
Location: 16153 - 16596 (-)
Type: pfam
Location: 16153 - 16596 (-)
Gene ID: Rep_98_c_17_15
Type: sulfatase
Location: 16583 - 17641 (-)
Type: sulfatase
Location: 16583 - 17641 (-)
Gene ID: Rep_98_c_17_16
Type: CAZyme
Location: 17845 - 18786 (-)
Type: CAZyme
Location: 17845 - 18786 (-)
Gene ID: Rep_98_c_17_17
Type: TC
Location: 18823 - 19836 (-)
Type: TC
Location: 18823 - 19836 (-)
Gene ID: Rep_98_c_17_18
Type: pfam
Location: 19874 - 20329 (-)
Type: pfam
Location: 19874 - 20329 (-)
Gene ID: Rep_98_c_17_19
Type: TC
Location: 20375 - 21037 (-)
Type: TC
Location: 20375 - 21037 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp902489445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.