Cluster: Rep_98_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_98
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_98_c_7 | Rep_98_c_7_19 | 22193 | 22771 | - | 9.B.18.1.2 |
| CAZyme | Rep_98_c_7 | Rep_98_c_7_20 | 22774 | 23775 | - | GT2 |
| NULL(UNKNOWN) | Rep_98_c_7 | Rep_98_c_7_21 | 23788 | 25056 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_98_c_7 | Rep_98_c_7_22 | 25053 | 25589 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_98_c_7 | Rep_98_c_7_23 | 25579 | 26760 | - | GT4 |
Gene ID: Rep_98_c_7_19
Type: TC
Location: 22193 - 22771 (-)
Type: TC
Location: 22193 - 22771 (-)
Gene ID: Rep_98_c_7_20
Type: CAZyme
Location: 22774 - 23775 (-)
Type: CAZyme
Location: 22774 - 23775 (-)
Gene ID: Rep_98_c_7_21
Type:
Location: 23788 - 25056 (-)
Type:
Location: 23788 - 25056 (-)
Gene ID: Rep_98_c_7_22
Type:
Location: 25053 - 25589 (-)
Type:
Location: 25053 - 25589 (-)
Gene ID: Rep_98_c_7_23
Type: CAZyme
Location: 25579 - 26760 (-)
Type: CAZyme
Location: 25579 - 26760 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp902489445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.