Cluster: Rep_98_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_98
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_98_c_30 | Rep_98_c_30_4 | 3480 | 4745 | - | GH23 |
| pfam | Rep_98_c_30 | Rep_98_c_30_5 | 4745 | 5524 | - | DUF5683 |
| pfam | Rep_98_c_30 | Rep_98_c_30_6 | 5543 | 6418 | - | ParBc | HTH_ParB | ParB_dimer |
| TC | Rep_98_c_30 | Rep_98_c_30_7 | 6454 | 7236 | - | 8.A.3.2.3 |
Gene ID: Rep_98_c_30_4
Type: CAZyme
Location: 3480 - 4745 (-)
Type: CAZyme
Location: 3480 - 4745 (-)
Gene ID: Rep_98_c_30_5
Type: pfam
Location: 4745 - 5524 (-)
Type: pfam
Location: 4745 - 5524 (-)
Gene ID: Rep_98_c_30_6
Type: pfam
Location: 5543 - 6418 (-)
Type: pfam
Location: 5543 - 6418 (-)
Gene ID: Rep_98_c_30_7
Type: TC
Location: 6454 - 7236 (-)
Type: TC
Location: 6454 - 7236 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp902489445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.