dbCAN HGM

Cluster: Rep_988_CGC64

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_988_c_20	Rep_988_c_20_371	412128	414653	+	GT51
TC	Rep_988_c_20	Rep_988_c_20_372	414889	417138	+	1.B.14.1.2
TC	Rep_988_c_20	Rep_988_c_20_373	417189	417986	+	3.A.1.14.3
TC	Rep_988_c_20	Rep_988_c_20_374	417986	418876	+	3.A.1.14.3
TC	Rep_988_c_20	Rep_988_c_20_375	418873	420855	+	3.A.1.14.3
pfam	Rep_988_c_20	Rep_988_c_20_376	420949	422229	-	Aminotran_3
TC	Rep_988_c_20	Rep_988_c_20_377	422407	423807	+	2.A.49.5.5
pfam	Rep_988_c_20	Rep_988_c_20_378	423887	424234	+	Fe-S_biosyn
TC	Rep_988_c_20	Rep_988_c_20_379	424327	424950	-	1.A.62.2.2
TC	Rep_988_c_20	Rep_988_c_20_380	424978	425778	-	3.A.1.13.1

Gene ID: Rep_988_c_20_371
Type: CAZyme
Location: 412128 - 414653 (+)

Gene ID: Rep_988_c_20_372
Type: TC
Location: 414889 - 417138 (+)

Gene ID: Rep_988_c_20_373
Type: TC
Location: 417189 - 417986 (+)

Gene ID: Rep_988_c_20_374
Type: TC
Location: 417986 - 418876 (+)

Gene ID: Rep_988_c_20_375
Type: TC
Location: 418873 - 420855 (+)

Gene ID: Rep_988_c_20_376
Type: pfam
Location: 420949 - 422229 (-)

Gene ID: Rep_988_c_20_377
Type: TC
Location: 422407 - 423807 (+)

Gene ID: Rep_988_c_20_378
Type: pfam
Location: 423887 - 424234 (+)

Gene ID: Rep_988_c_20_379
Type: TC
Location: 424327 - 424950 (-)

Gene ID: Rep_988_c_20_380
Type: TC
Location: 424978 - 425778 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_988_c_20_377	vegetarian > omnivore	1.23509	0.03339
Rep_988_c_20_377	vegetarian > vegan	1.25344	0.03565
Rep_988_c_20_379	vegetarian > omnivore	1.08735	0.03403

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_988_c_20_371	omnivore > flexitarian	1.35242	0.01845