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Cluster: Rep_988_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_988_c_20 Rep_988_c_20_352 392830 393138 - 8.A.2.1.3
CAZyme Rep_988_c_20 Rep_988_c_20_353 393284 394891 + AA1
pfam Rep_988_c_20 Rep_988_c_20_354 395024 397414 - PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2
STP Rep_988_c_20 Rep_988_c_20_355 397623 398159 + Pribosyltran
TC Rep_988_c_20 Rep_988_c_20_356 398221 398883 - 2.A.53.3.8
TC Rep_988_c_20 Rep_988_c_20_357 398991 399917 + 3.A.1.105.17
TC Rep_988_c_20 Rep_988_c_20_358 399914 400684 + 3.A.1.105.17
pfam Rep_988_c_20 Rep_988_c_20_359 400789 401229 + EIIA-man
CAZyme Rep_988_c_20 Rep_988_c_20_360 401292 402539 + CE4
Gene ID: Rep_988_c_20_352
Type: TC
Location: 392830 - 393138 (-)
Gene ID: Rep_988_c_20_353
Type: CAZyme
Location: 393284 - 394891 (+)
Gene ID: Rep_988_c_20_354
Type: pfam
Location: 395024 - 397414 (-)
Gene ID: Rep_988_c_20_355
Type: STP
Location: 397623 - 398159 (+)
Gene ID: Rep_988_c_20_356
Type: TC
Location: 398221 - 398883 (-)
Gene ID: Rep_988_c_20_357
Type: TC
Location: 398991 - 399917 (+)
Gene ID: Rep_988_c_20_358
Type: TC
Location: 399914 - 400684 (+)
Gene ID: Rep_988_c_20_359
Type: pfam
Location: 400789 - 401229 (+)
Gene ID: Rep_988_c_20_360
Type: CAZyme
Location: 401292 - 402539 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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