Cluster: Rep_988_CGC62
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_988
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_988_c_20 | Rep_988_c_20_338 | 372546 | 373400 | + | 9.B.125.1.1 |
| CAZyme | Rep_988_c_20 | Rep_988_c_20_339 | 373419 | 374369 | - | GH43_26 |
| TC | Rep_988_c_20 | Rep_988_c_20_340 | 374380 | 375777 | - | 2.A.2.3.4 |
| TC | Rep_988_c_20 | Rep_988_c_20_341 | 375942 | 377312 | - | 2.A.3.1.3 |
Gene ID: Rep_988_c_20_338
Type: TC
Location: 372546 - 373400 (+)
Type: TC
Location: 372546 - 373400 (+)
Gene ID: Rep_988_c_20_339
Type: CAZyme
Location: 373419 - 374369 (-)
Type: CAZyme
Location: 373419 - 374369 (-)
Gene ID: Rep_988_c_20_340
Type: TC
Location: 374380 - 375777 (-)
Type: TC
Location: 374380 - 375777 (-)
Gene ID: Rep_988_c_20_341
Type: TC
Location: 375942 - 377312 (-)
Type: TC
Location: 375942 - 377312 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter cloacae_M
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_988_c_20_339 | vegan > omnivore | 1.40112 | 0.03136 |
| Rep_988_c_20_339 | vegetarian > omnivore | 1.77413 | 0.01511 |