dbCAN HGM

Cluster: Rep_988_CGC6

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_988_c_6	Rep_988_c_6_89	96207	97064	-	3.A.1.15.10
TC	Rep_988_c_6	Rep_988_c_6_90	97100	97960	-	3.A.1.15.10
TC	Rep_988_c_6	Rep_988_c_6_91	97957	98610	-	3.A.1.15.10
CAZyme	Rep_988_c_6	Rep_988_c_6_92	98923	100023	-	GH103
TC	Rep_988_c_6	Rep_988_c_6_93	100276	100839	+	4.A.4.1.1
TC	Rep_988_c_6	Rep_988_c_6_94	100836	101795	+	4.A.4.1.1
TC	Rep_988_c_6	Rep_988_c_6_95	101808	102170	+	4.A.4.1.1

Gene ID: Rep_988_c_6_89
Type: TC
Location: 96207 - 97064 (-)

Gene ID: Rep_988_c_6_90
Type: TC
Location: 97100 - 97960 (-)

Gene ID: Rep_988_c_6_91
Type: TC
Location: 97957 - 98610 (-)

Gene ID: Rep_988_c_6_92
Type: CAZyme
Location: 98923 - 100023 (-)

Gene ID: Rep_988_c_6_93
Type: TC
Location: 100276 - 100839 (+)

Gene ID: Rep_988_c_6_94
Type: TC
Location: 100836 - 101795 (+)

Gene ID: Rep_988_c_6_95
Type: TC
Location: 101808 - 102170 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_988_c_6_89	vegetarian > omnivore	1.09806	0.03403
Rep_988_c_6_89	vegetarian > vegan	1.60650	0.04151
Rep_988_c_6_91	vegetarian > omnivore	1.72198	0.03403
Rep_988_c_6_91	vegetarian > vegan	1.29280	0.04151
Rep_988_c_6_95	vegetarian > omnivore	1.04357	0.03403

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_988_c_6_92	omnivore > flexitarian	1.36867	0.01845