Cluster: Rep_988_CGC57
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_988
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_988_c_20 | Rep_988_c_20_143 | 161024 | 162112 | + | GH5_13 |
| TC | Rep_988_c_20 | Rep_988_c_20_144 | 162163 | 163560 | + | 2.A.2.1.1 |
| peptidase | Rep_988_c_20 | Rep_988_c_20_145 | 163655 | 164476 | - | S33.UPW |
| TC | Rep_988_c_20 | Rep_988_c_20_146 | 164507 | 166126 | - | 2.A.1.30.1 |
Gene ID: Rep_988_c_20_143
Type: CAZyme
Location: 161024 - 162112 (+)
Type: CAZyme
Location: 161024 - 162112 (+)
Gene ID: Rep_988_c_20_144
Type: TC
Location: 162163 - 163560 (+)
Type: TC
Location: 162163 - 163560 (+)
Gene ID: Rep_988_c_20_145
Type: peptidase
Location: 163655 - 164476 (-)
Type: peptidase
Location: 163655 - 164476 (-)
Gene ID: Rep_988_c_20_146
Type: TC
Location: 164507 - 166126 (-)
Type: TC
Location: 164507 - 166126 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter cloacae_M
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_988_c_20_143 | vegetarian > vegan | 1.14410 | 0.04151 |
| Rep_988_c_20_145 | vegetarian > omnivore | 1.12994 | 0.03403 |