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Cluster: Rep_988_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_988_c_17 Rep_988_c_17_123 128685 130076 + 2.A.2.3.4
CAZyme Rep_988_c_17 Rep_988_c_17_124 130089 132407 + GH31_3
pfam Rep_988_c_17 Rep_988_c_17_125 132565 134253 - AsmA
TC Rep_988_c_17 Rep_988_c_17_126 134373 135764 - 2.A.40.4.2
TC Rep_988_c_17 Rep_988_c_17_127 135990 137192 + 2.A.27.1.1
Gene ID: Rep_988_c_17_123
Type: TC
Location: 128685 - 130076 (+)
Gene ID: Rep_988_c_17_124
Type: CAZyme
Location: 130089 - 132407 (+)
Gene ID: Rep_988_c_17_125
Type: pfam
Location: 132565 - 134253 (-)
Gene ID: Rep_988_c_17_126
Type: TC
Location: 134373 - 135764 (-)
Gene ID: Rep_988_c_17_127
Type: TC
Location: 135990 - 137192 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_988_c_17_124 vegetarian > omnivore 1.38279 0.02878

🧭 Explore Read Mapping of CGC

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