dbCAN HGM

Cluster: Rep_988_CGC45

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_988_c_15	Rep_988_c_15_476	513013	514200	-	2.A.1.2.26
TF	Rep_988_c_15	Rep_988_c_15_477	514316	515272	+	HTH_AraC \| HTH_AraC
CAZyme	Rep_988_c_15	Rep_988_c_15_478	515375	517060	+	GH37
TC	Rep_988_c_15	Rep_988_c_15_479	517251	519353	-	1.B.14.1.2
TC	Rep_988_c_15	Rep_988_c_15_480	519466	519720	-	1.E.43.1.1
pfam	Rep_988_c_15	Rep_988_c_15_481	519929	520660	+	PilZ \| PilZN
CAZyme	Rep_988_c_15	Rep_988_c_15_482	520698	521309	-	GH23
peptidase	Rep_988_c_15	Rep_988_c_15_483	521417	522331	+	S66.002
TC	Rep_988_c_15	Rep_988_c_15_484	522429	524162	+	2.A.36.6.11

Gene ID: Rep_988_c_15_476
Type: TC
Location: 513013 - 514200 (-)

Gene ID: Rep_988_c_15_477
Type: TF
Location: 514316 - 515272 (+)

Gene ID: Rep_988_c_15_478
Type: CAZyme
Location: 515375 - 517060 (+)

Gene ID: Rep_988_c_15_479
Type: TC
Location: 517251 - 519353 (-)

Gene ID: Rep_988_c_15_480
Type: TC
Location: 519466 - 519720 (-)

Gene ID: Rep_988_c_15_481
Type: pfam
Location: 519929 - 520660 (+)

Gene ID: Rep_988_c_15_482
Type: CAZyme
Location: 520698 - 521309 (-)

Gene ID: Rep_988_c_15_483
Type: peptidase
Location: 521417 - 522331 (+)

Gene ID: Rep_988_c_15_484
Type: TC
Location: 522429 - 524162 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_988_c_15_479	vegetarian > omnivore	1.02839	0.03403
Rep_988_c_15_479	vegetarian > vegan	1.54963	0.04151
Rep_988_c_15_481	vegetarian > omnivore	2.85905	0.02632
Rep_988_c_15_481	vegetarian > vegan	2.01208	0.04151
Rep_988_c_15_482	vegetarian > omnivore	1.26848	0.03403
Rep_988_c_15_482	vegetarian > vegan	1.39007	0.04151
Rep_988_c_15_483	vegetarian > vegan	1.41668	0.04151