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Cluster: Rep_988_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_988_c_14 Rep_988_c_14_1021 1061358 1062968 - 2.A.1.42.2
pfam Rep_988_c_14 Rep_988_c_14_1022 1062978 1064153 - Chorismate_bind
TC Rep_988_c_14 Rep_988_c_14_1023 1064342 1065301 + 3.A.1.14.2
TC Rep_988_c_14 Rep_988_c_14_1024 1065385 1066620 - 2.A.1.38.1
TC Rep_988_c_14 Rep_988_c_14_1025 1066729 1067733 + 3.A.1.14.2
TC Rep_988_c_14 Rep_988_c_14_1026 1067730 1068722 + 3.A.1.14.2
TC Rep_988_c_14 Rep_988_c_14_1027 1068719 1069513 + 3.A.1.14.2
TC Rep_988_c_14 Rep_988_c_14_1028 1069687 1073544 - 4.C.1.1.6
pfam Rep_988_c_14 Rep_988_c_14_1029 1073541 1073753 - MbtH
peptidase Rep_988_c_14 Rep_988_c_14_1030 1073764 1075038 - S09.UNW
TC Rep_988_c_14 Rep_988_c_14_1031 1075107 1077347 + 1.B.14.1.22
pfam Rep_988_c_14 Rep_988_c_14_1032 1077538 1078194 + ACPS | 4PPT_N
TC Rep_988_c_14 Rep_988_c_14_1033 1078309 1080342 - 2.A.15.1.4
STP Rep_988_c_14 Rep_988_c_14_1034 1080471 1081058 + TetR_N
sulfatase Rep_988_c_14 Rep_988_c_14_1035 1081072 1082544 + S1_6
CAZyme Rep_988_c_14 Rep_988_c_14_1036 1082558 1084222 + AA3_2
Gene ID: Rep_988_c_14_1021
Type: TC
Location: 1061358 - 1062968 (-)
Gene ID: Rep_988_c_14_1022
Type: pfam
Location: 1062978 - 1064153 (-)
Gene ID: Rep_988_c_14_1023
Type: TC
Location: 1064342 - 1065301 (+)
Gene ID: Rep_988_c_14_1024
Type: TC
Location: 1065385 - 1066620 (-)
Gene ID: Rep_988_c_14_1025
Type: TC
Location: 1066729 - 1067733 (+)
Gene ID: Rep_988_c_14_1026
Type: TC
Location: 1067730 - 1068722 (+)
Gene ID: Rep_988_c_14_1027
Type: TC
Location: 1068719 - 1069513 (+)
Gene ID: Rep_988_c_14_1028
Type: TC
Location: 1069687 - 1073544 (-)
Gene ID: Rep_988_c_14_1029
Type: pfam
Location: 1073541 - 1073753 (-)
Gene ID: Rep_988_c_14_1030
Type: peptidase
Location: 1073764 - 1075038 (-)
Gene ID: Rep_988_c_14_1031
Type: TC
Location: 1075107 - 1077347 (+)
Gene ID: Rep_988_c_14_1032
Type: pfam
Location: 1077538 - 1078194 (+)
Gene ID: Rep_988_c_14_1033
Type: TC
Location: 1078309 - 1080342 (-)
Gene ID: Rep_988_c_14_1034
Type: STP
Location: 1080471 - 1081058 (+)
Gene ID: Rep_988_c_14_1035
Type: sulfatase
Location: 1081072 - 1082544 (+)
Gene ID: Rep_988_c_14_1036
Type: CAZyme
Location: 1082558 - 1084222 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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