dbCAN HGM

Cluster: Rep_988_CGC38

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_988_c_14	Rep_988_c_14_891	924502	925785	+	CE8
pfam	Rep_988_c_14	Rep_988_c_14_892	925907	926902	-	Lactonase
pfam	Rep_988_c_14	Rep_988_c_14_893	927043	927861	+	Hydrolase \| S6PP \| S6PP \| Hydrolase_3
TC	Rep_988_c_14	Rep_988_c_14_894	927862	928920	-	3.A.1.8.1
TC	Rep_988_c_14	Rep_988_c_14_895	928923	929612	-	3.A.1.8.1
TC	Rep_988_c_14	Rep_988_c_14_896	929612	930385	-	3.A.1.8.1
TC	Rep_988_c_14	Rep_988_c_14_897	930564	930713	-	2.A.6.2.49
TF	Rep_988_c_14	Rep_988_c_14_898	930841	931629	+	HTH_1
TC	Rep_988_c_14	Rep_988_c_14_899	931697	933169	+	3.A.1.26.3

Gene ID: Rep_988_c_14_891
Type: CAZyme
Location: 924502 - 925785 (+)

Gene ID: Rep_988_c_14_892
Type: pfam
Location: 925907 - 926902 (-)

Gene ID: Rep_988_c_14_893
Type: pfam
Location: 927043 - 927861 (+)

Gene ID: Rep_988_c_14_894
Type: TC
Location: 927862 - 928920 (-)

Gene ID: Rep_988_c_14_895
Type: TC
Location: 928923 - 929612 (-)

Gene ID: Rep_988_c_14_896
Type: TC
Location: 929612 - 930385 (-)

Gene ID: Rep_988_c_14_897
Type: TC
Location: 930564 - 930713 (-)

Gene ID: Rep_988_c_14_898
Type: TF
Location: 930841 - 931629 (+)

Gene ID: Rep_988_c_14_899
Type: TC
Location: 931697 - 933169 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_988_c_14_895	vegetarian > omnivore	1.11104	0.03403
Rep_988_c_14_895	vegetarian > vegan	1.24981	0.04151
Rep_988_c_14_897	vegetarian > vegan	1.45965	0.04151
Rep_988_c_14_898	vegetarian > omnivore	2.52615	0.03322